RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 TRIM61Q5EBN2 209 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 ERICH6BQ5W0A0 696 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 TRIM48Q8IWZ4 208 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 FAM126BQ8IXS8 530 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 PCDH19Q8TAB3 1148 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 FBXO41Q8TF61 875 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 MAGEB10Q96LZ2 347 aaPredicted RBP5.86□□□□□ -1.47
USP48-211ENST00000526044 PWWP2AQ96N64 755 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 YIPF4Q9BSR8 244 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 SLC52A2Q9HAB3 445 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 PCDH18Q9HCL0 1135 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 NGRNQ9NPE2 291 aaKnown RBP5.86□□□□□ -1.47
USP48-211ENST00000526044 MYOTQ9UBF9 498 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 NUB1Q9Y5A7 615 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 PCDHA9Q9Y5H5 950 aa5.86□□□□□ -1.47
USP48-211ENST00000526044 ANKRD26Q9UPS8 1709 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 AHDC1Q5TGY3 1603 aaPredicted RBP5.85□□□□□ -1.47
USP48-211ENST00000526044 NRKQ7Z2Y5 1582 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 TNS3Q68CZ2 1445 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 MYBBP1AQ9BQG0 1328 aaKnown RBP5.85□□□□□ -1.47
USP48-211ENST00000526044 ARVCFO00192 962 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 WNT9AO14904 365 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 GSTA4O15217 222 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 PPM1GO15355 546 aaPredicted RBP5.85□□□□□ -1.47
USP48-211ENST00000526044 KCNQ2O43526 872 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 NFIXQ14938 502 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 TCERG1LQ5VWI1 586 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 CD300LDQ6UXZ3 194 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 ZC3H18Q86VM9 953 aaKnown RBP5.85□□□□□ -1.47
USP48-211ENST00000526044 ARRDC4Q8NCT1 418 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 GSTCDQ8NEC7 633 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 SMARCC2Q8TAQ2 1214 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 SLC7A14Q8TBB6 771 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 FBXW5Q969U6 566 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 DACT3Q96B18 629 aaPredicted RBP5.85□□□□□ -1.47
USP48-211ENST00000526044 DDX11Q96FC9 970 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 BORCS6Q96GS4 357 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 KANSL2Q9H9L4 492 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 NCOA5Q9HCD5 579 aaKnown RBP5.85□□□□□ -1.47
USP48-211ENST00000526044 ASH2LQ9UBL3 628 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 POLKQ9UBT6 870 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 SFMBT1Q9UHJ3 866 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 PIK3C2AO00443 1686 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 ALS2Q96Q42 1657 aa5.85□□□□□ -1.47
USP48-211ENST00000526044 AATKQ6ZMQ8 1374 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 PARD3Q8TEW0 1356 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 CCER2I3L3R5 266 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 PLD2O14939 933 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 SLC27A2O14975 620 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 CYP2C8P10632 490 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 AMPHP49418 695 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 AFF3P51826 1226 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 CAP1Q01518 475 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 RRS1Q15050 365 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 HABP4Q5JVS0 413 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 C16orf59Q7L2K0 433 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 ZC3H7AQ8IWR0 971 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 UHMK1Q8TAS1 419 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 TOE1Q96GM8 510 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 RNPC3Q96LT9 517 aaKnown RBP5.84□□□□□ -1.47
USP48-211ENST00000526044 CFAP53Q96M91 514 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 TMEM260Q9NX78 707 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 DSEQ9UL01 958 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 PMF1-BGLAPU3KQ54 211 aa5.84□□□□□ -1.47
USP48-211ENST00000526044 OVOS2A0A0J9YW53 1432 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 OVOS2Q6IE36 1432 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 PNPLA6Q8IY17 1366 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 JCADQ9P266 1359 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 USP19O94966 1318 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 FAM83GA6ND36 823 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 NKRFO15226 690 aaKnown RBP eCLIP5.83□□□□□ -1.48
USP48-211ENST00000526044 C8BP07358 591 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 SRGAP2CP0DJJ0 459 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 EVA1CP58658 441 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 NKX3-2P78367 333 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 ST5P78524 1137 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 FNDC3BQ53EP0 1204 aaKnown RBP5.83□□□□□ -1.48
USP48-211ENST00000526044 FAM47CQ5HY64 1035 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 ARHGEF25Q86VW2 580 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 FAM26EQ8N5C1 309 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 FNIP1Q8TF40 1166 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 IP6K1Q92551 441 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 CATSPERZQ9NTU4 200 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 DTLQ9NZJ0 730 aa5.83□□□□□ -1.48
USP48-211ENST00000526044 COL16A1Q07092 1604 aaPredicted RBP5.83□□□□□ -1.48
USP48-211ENST00000526044 MARF1Q9Y4F3 1742 aaKnown RBP5.82□□□□□ -1.48
USP48-211ENST00000526044 MAP3K19Q56UN5 1328 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 SPATA31A6Q5VVP1 1343 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 MED1Q15648 1581 aaPredicted RBP5.82□□□□□ -1.48
USP48-211ENST00000526044 ESYT3A0FGR9 886 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 PLA2G1BP04054 148 aaKnown RBP5.82□□□□□ -1.48
USP48-211ENST00000526044 PYGMP11217 842 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 STAT5AP42229 794 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 HTRA3P83110 453 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 TUSC3Q13454 348 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 GPR19Q15760 415 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 CRY1Q16526 586 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 CR1LQ2VPA4 569 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 CCDC184Q52MB2 194 aa5.82□□□□□ -1.48
USP48-211ENST00000526044 HSP90AB2PQ58FF8 381 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms