RNA–Protein interactions for RNA: ENST00000525990.1

SSBP3-210, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-210ENST00000525990 EML1O00423 815 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 STBD1O95210 358 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 FGFR4P22455 802 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 BMPR1AP36894 532 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 NLRP11P59045 1033 aaKnown RBP13.6□□□□□ -0.23
SSBP3-210ENST00000525990 ST3GAL1Q11201 340 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 EFCAB12Q6NXP0 572 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 MIER3Q7Z3K6 550 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 NPAS4Q8IUM7 802 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 BANK1Q8NDB2 785 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 CLP1Q92989 425 aaKnown RBP13.6□□□□□ -0.23
SSBP3-210ENST00000525990 ADAM2Q99965 735 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 FTHL17Q9BXU8 183 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 ALG13Q9NP73 1137 aaKnown RBP13.6□□□□□ -0.23
SSBP3-210ENST00000525990 DDX25Q9UHL0 483 aaKnown RBP13.6□□□□□ -0.23
SSBP3-210ENST00000525990 AKT3Q9Y243 479 aa13.6□□□□□ -0.23
SSBP3-210ENST00000525990 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-210ENST00000525990 C5orf67F2Z3F1 127 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 CSDE1O75534 798 aaKnown RBP13.59□□□□□ -0.23
SSBP3-210ENST00000525990 KCNA5P22460 613 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 DNAJB1P25685 340 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 GTF2F1P35269 517 aaKnown RBP eCLIP13.59□□□□□ -0.231e-6■■■■□ 23.4
SSBP3-210ENST00000525990 JAK3P52333 1124 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 CRYBB1P53674 252 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-210ENST00000525990 ANAPC15P60006 121 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 NR5A1Q13285 461 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 CAMK1Q14012 370 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 AAK1Q2M2I8 961 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 MTERF2Q49AM1 385 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 FAM102BQ5T8I3 360 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 PIK3AP1Q6ZUJ8 805 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 KRT25Q7Z3Z0 450 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 KHSRPQ92945 711 aaKnown RBP eCLIP13.59□□□□□ -0.232e-9■■■■□ 21
SSBP3-210ENST00000525990 FAM167AQ96KS9 214 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 CEP89Q96ST8 783 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 ADAMTS10Q9H324 1103 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 CD320Q9NPF0 282 aa13.59□□□□□ -0.23
SSBP3-210ENST00000525990 WRAP73Q9P2S5 460 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-210ENST00000525990 ORC3Q9UBD5 711 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-210ENST00000525990 SEPT9Q9UHD8 586 aaPredicted RBP13.59□□□□□ -0.23
SSBP3-210ENST00000525990 DENND3A2RUS2 1198 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 C9IYK1 514 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 H3BQ06 376 aaPredicted RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 WNT7AO00755 349 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 JAK2O60674 1132 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 CDKL5O76039 1030 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 FGFR1P11362 822 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 SFNP31947 248 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 SARSP49591 514 aaKnown RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 DSC3Q14574 896 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 TARBP2Q15633 366 aaKnown RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 PTPROQ16827 1216 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 PLA2G4FQ68DD2 849 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 GALNT17Q6IS24 598 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 MOXD1Q6UVY6 613 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 POTEDQ86YR6 584 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 CMTR2Q8IYT2 770 aaKnown RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 NSUN7Q8NE18 718 aaKnown RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.58□□□□□ -0.24
SSBP3-210ENST00000525990 GTF3C6Q969F1 213 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 C22orf23Q9BZE7 217 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 KCNMB3Q9NPA1 279 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 RGS18Q9NS28 235 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 VAV3Q9UKW4 847 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 PCDHGC5Q9Y5F6 944 aa13.58□□□□□ -0.24
SSBP3-210ENST00000525990 CCDC194A0A1B0GVG4 234 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 MAGEB2O15479 319 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 LINC01565O15544 149 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 CCNT1O60563 726 aaKnown RBP13.57□□□□□ -0.24
SSBP3-210ENST00000525990 ITGB1P05556 798 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 IL9P15248 144 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 IRS1P35568 1242 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 GPC3P51654 580 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 NEK4P51957 841 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 TBC1D8BQ0IIM8 1120 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 TIGD5Q53EQ6 642 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 ERICH6BQ5W0A0 696 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 EP400NLQ6ZTU2 488 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 ANO5Q75V66 913 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 NEK8Q86SG6 692 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 HAS1Q92839 578 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 TNFRSF25Q93038 417 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 C11orf84Q9BUA3 381 aaPredicted RBP13.57□□□□□ -0.24
SSBP3-210ENST00000525990 NSUN3Q9H649 340 aaKnown RBP13.57□□□□□ -0.24
SSBP3-210ENST00000525990 NRBP2Q9NSY0 501 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 RNF19AQ9NV58 838 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 LRFN2Q9ULH4 789 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 CEP131Q9UPN4 1083 aa13.57□□□□□ -0.24
SSBP3-210ENST00000525990 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 GPR182O15218 404 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 RB1P06400 928 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 STAG3L1P0CL83 205 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 NPEPPSP55786 919 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 DLX2Q07687 328 aaPredicted RBP13.56□□□□□ -0.24
SSBP3-210ENST00000525990 HYAL1Q12794 435 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 SLC24A5Q71RS6 500 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 ADGRD2Q7Z7M1 963 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 KSR1Q8IVT5 923 aa13.56□□□□□ -0.24
SSBP3-210ENST00000525990 KLHL23Q8NBE8 558 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms