RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 IFNL2Q8IZJ0 200 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 CALML6Q8TD86 181 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 CFHR4Q92496 578 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 NEIL1Q96FI4 390 aaPredicted RBP5.88□□□□□ -1.47
CD44-217ENST00000525348 MAML3Q96JK9 1138 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 WWC2-AS2Q96NR7 200 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 LRRC37BQ96QE4 947 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 ZMAT4Q9H898 229 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 SEC61A2Q9H9S3 476 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 THG1LQ9NWX6 298 aaKnown RBP5.88□□□□□ -1.47
CD44-217ENST00000525348 PLAAQ9Y263 795 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 SPO11Q9Y5K1 396 aa5.88□□□□□ -1.47
CD44-217ENST00000525348 UBA6A0AVT1 1052 aaPredicted RBP5.87□□□□□ -1.47
CD44-217ENST00000525348 TGM5O43548 720 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 CYP17A1P05093 508 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 ADRB1P08588 477 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 MRE11P49959 708 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 ANTXR2P58335 489 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 EPHA7Q15375 998 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 LCE5AQ5TCM9 118 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 AGBL4Q5VU57 503 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 KIF18BQ86Y91 864 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 TTC9BQ8N6N2 239 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 WDR48Q8TAF3 677 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 SCYL1Q96KG9 808 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 LMF1Q96S06 567 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 TOMM22Q9NS69 142 aa5.87□□□□□ -1.47
CD44-217ENST00000525348 TLDC2A0PJX2 215 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 PATE3B3GLJ2 98 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 ARHGAP6O43182 974 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 FOXS1O43638 330 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 ROM1Q03395 351 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 DUSP8Q13202 625 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 NFYCQ13952 458 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 CDSNQ15517 529 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 TTC38Q5R3I4 469 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 SLFN12LQ6IEE8 588 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 TCTN3Q6NUS6 607 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 SMC1BQ8NDV3 1235 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 OR5AN1Q8NGI8 311 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 RTF1Q92541 710 aaKnown RBP5.86□□□□□ -1.47
CD44-217ENST00000525348 DPYSL5Q9BPU6 564 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 SEMA4AQ9H3S1 761 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 MS4A5Q9H3V2 200 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 ZKSCAN5Q9Y2L8 839 aa5.86□□□□□ -1.47
CD44-217ENST00000525348 LCHNA4D1U4 455 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 GAS7O60861 476 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 ZNF20P17024 532 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 GYS2P54840 703 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 SMAD3P84022 425 aaKnown RBP5.85□□□□□ -1.47
CD44-217ENST00000525348 HGFACQ04756 655 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 ZMAT1Q5H9K5 638 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 PRAMEF9Q5VWM5 478 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 TAX1BP1Q86VP1 789 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 RTKN2Q8IZC4 609 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 PPM1KQ8N3J5 372 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 EFHBQ8N7U6 833 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 E2F7Q96AV8 911 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 SPTLC3Q9NUV7 552 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 IFT57Q9NWB7 429 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 OAZ3Q9UMX2 235 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 NR2E1Q9Y466 385 aa5.85□□□□□ -1.47
CD44-217ENST00000525348 PDE8AO60658 829 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 MYCLP1P12525 358 aaPredicted RBP5.84□□□□□ -1.47
CD44-217ENST00000525348 ADCYAP1R1P41586 468 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 RAC3P60763 192 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 UNQ6494/PRO21346Q6UXR6 183 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 USP30Q70CQ3 517 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 KANSL1Q7Z3B3 1105 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 GGNQ86UU5 652 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 OR14K1Q8NGZ2 314 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 Q8TCH9 128 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 GPR101Q96P66 508 aaPredicted RBP5.84□□□□□ -1.47
CD44-217ENST00000525348 TUBGCP5Q96RT8 1024 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 MYL10Q9BUA6 226 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 C1QTNF3Q9BXJ4 246 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 OR10A2Q9H208 303 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 POFUT1Q9H488 388 aa5.84□□□□□ -1.47
CD44-217ENST00000525348 ELL2O00472 640 aaPredicted RBP5.83□□□□□ -1.48
CD44-217ENST00000525348 CR2P20023 1033 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 MEOX1P50221 254 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 ADAM15Q13444 863 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 ACAP1Q15027 740 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 ZNF568Q3ZCX4 644 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 SDE2Q6IQ49 451 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 THNSL2Q86YJ6 484 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 LEO1Q8WVC0 666 aaPredicted RBP5.83□□□□□ -1.48
CD44-217ENST00000525348 NKD2Q969F2 451 aaPredicted RBP5.83□□□□□ -1.48
CD44-217ENST00000525348 HAPLN2Q9GZV7 340 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 ZFR2Q9UPR6 939 aaKnown RBP5.83□□□□□ -1.48
CD44-217ENST00000525348 JAG2Q9Y219 1238 aa5.83□□□□□ -1.48
CD44-217ENST00000525348 CTDP1Q9Y5B0 961 aaPredicted RBP5.83□□□□□ -1.48
CD44-217ENST00000525348 IGSF3O75054 1194 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 ZNF623O75123 536 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 PRPF6O94906 941 aaKnown RBP5.82□□□□□ -1.48
CD44-217ENST00000525348 STAT3P40763 770 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 ADCY1Q08828 1119 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 MAP3K12Q12852 859 aa5.82□□□□□ -1.48
CD44-217ENST00000525348 R3HDM1Q15032 1099 aaKnown RBP5.82□□□□□ -1.48
CD44-217ENST00000525348 ZNF585AQ6P3V2 769 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms