RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 HDGFL2Q7Z4V5 671 aaPredicted RBP6.08□□□□□ -1.44
CD44-215ENST00000525241 SP8Q8IXZ3 490 aa6.08□□□□□ -1.44
CD44-215ENST00000525241 WDR48Q8TAF3 677 aa6.08□□□□□ -1.44
CD44-215ENST00000525241 LCORQ96JN0 433 aaPredicted RBP6.08□□□□□ -1.44
CD44-215ENST00000525241 BRINP2Q9C0B6 783 aa6.08□□□□□ -1.44
CD44-215ENST00000525241 KATNBL1Q9H079 304 aa6.08□□□□□ -1.44
CD44-215ENST00000525241 VTA1Q9NP79 307 aa6.08□□□□□ -1.44
CD44-215ENST00000525241 MROH6A6NGR9 719 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 CDK11BP21127 795 aaKnown RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 CDKN1CP49918 316 aaPredicted RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 ADCY2Q08462 1091 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 NT5DC1Q5TFE4 455 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 TMEM200BQ69YZ2 307 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 GRAMD4Q6IC98 578 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 TIGD7Q6NT04 549 aaPredicted RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 UNQ6494/PRO21346Q6UXR6 183 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 FRMD7Q6ZUT3 714 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 SPATS2Q86XZ4 545 aaKnown RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 BCL6BQ8N143 479 aaPredicted RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 KLHL36Q8N4N3 616 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 ZCRB1Q8TBF4 217 aaKnown RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 AJUBAQ96IF1 538 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 TOPORSQ9NS56 1045 aaPredicted RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 FBXO10Q9UK96 956 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 ADAM29Q9UKF5 820 aa6.07□□□□□ -1.44
CD44-215ENST00000525241 NOC2LQ9Y3T9 749 aaKnown RBP6.07□□□□□ -1.44
CD44-215ENST00000525241 A0A0G2JNJ9 132 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 KDM1AO60341 852 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 CUTAO60888 179 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 RAB11FIP3O75154 756 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 APOL3O95236 402 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 CSF2RBP32927 897 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 ETV4P43268 484 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 EIF4HQ15056 248 aaKnown RBP6.06□□□□□ -1.44
CD44-215ENST00000525241 PDCD1Q15116 288 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 ZBTB41Q5SVQ8 909 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 IQSEC1Q6DN90 963 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 KIAA1841Q6NSI8 718 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 SPOCD1Q6ZMY3 1216 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 ESPNLQ6ZVH7 1005 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 REXO1L1PQ8IX06 675 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 PRPF38AQ8NAV1 312 aaKnown RBP6.06□□□□□ -1.44
CD44-215ENST00000525241 FEZF2Q8TBJ5 459 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 COG1Q8WTW3 980 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 XYLT2Q9H1B5 865 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 BARX1Q9HBU1 254 aaPredicted RBP6.06□□□□□ -1.44
CD44-215ENST00000525241 Q9UFV3 132 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 CDC42EP3Q9UKI2 254 aa6.06□□□□□ -1.44
CD44-215ENST00000525241 PRKD3O94806 890 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 SASH1O94885 1247 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 BCAR1P56945 870 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 GJA9P57773 515 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 ANTXR2P58335 489 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 TRIM68Q6AZZ1 485 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 OTOP2Q7RTS6 562 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 CXorf67Q86X51 503 aaPredicted RBP6.05□□□□□ -1.44
CD44-215ENST00000525241 PITHD1Q9GZP4 211 aaPredicted RBP6.05□□□□□ -1.44
CD44-215ENST00000525241 PARD6AQ9NPB6 346 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 KCMF1Q9P0J7 381 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 DENND2AQ9ULE3 1009 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 ZDHHC9Q9Y397 364 aa6.05□□□□□ -1.44
CD44-215ENST00000525241 A0A0A6YYJ9 748 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 PRSS38A1L453 326 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 OTOL1A6NHN0 477 aaPredicted RBP6.04□□□□□ -1.44
CD44-215ENST00000525241 ZNF888P0CJ79 500 aaPredicted RBP6.04□□□□□ -1.44
CD44-215ENST00000525241 KCNQ1P51787 676 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 MANFP55145 182 aaKnown RBP6.04□□□□□ -1.44
CD44-215ENST00000525241 EVA1CP58658 441 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 KIAA2012Q0VF49 1180 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 MAP3K12Q12852 859 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 FZD5Q13467 585 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 LARP4Q71RC2 724 aaKnown RBP eCLIP6.04□□□□□ -1.44
CD44-215ENST00000525241 NECAB2Q7Z6G3 386 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 CMIPQ8IY22 773 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 OR5AN1Q8NGI8 311 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 RPGRQ92834 1020 aaKnown RBP6.04□□□□□ -1.44
CD44-215ENST00000525241 CARD11Q9BXL7 1154 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 ANO3Q9BYT9 981 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 HAPLN2Q9GZV7 340 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 MTG2Q9H4K7 406 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 ZCCHC4Q9H5U6 513 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 SLC5A4Q9NY91 659 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 MAGEL2Q9UJ55 1249 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 TMPRSS11EQ9UL52 423 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 PTPN22Q9Y2R2 807 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 NOP58Q9Y2X3 529 aaKnown RBP6.04□□□□□ -1.44
CD44-215ENST00000525241 PPP2R3BQ9Y5P8 575 aa6.04□□□□□ -1.44
CD44-215ENST00000525241 B4GALT3O60512 393 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 HMGCRP04035 888 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 PFKMP08237 780 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 IBSPP21815 317 aaPredicted RBP6.03□□□□□ -1.44
CD44-215ENST00000525241 FAPQ12884 760 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 DGKDQ16760 1214 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 ZNF827Q17R98 1081 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 GPR155Q7Z3F1 870 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 BMP8AQ7Z5Y6 402 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 FAM124AQ86V42 546 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 KBTBD2Q8IY47 623 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 IFNL2Q8IZJ0 200 aa6.03□□□□□ -1.44
CD44-215ENST00000525241 ZDHHC14Q8IZN3 488 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms