RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 SEL1LQ9UBV2 794 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 CCPG1Q9ULG6 757 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 CTDP1Q9Y5B0 961 aaPredicted RBP8.36□□□□□ -1.07
CTR9-202ENST00000524523 PAXBP1Q9Y5B6 917 aa8.36□□□□□ -1.07
CTR9-202ENST00000524523 A0A087WWV3 80 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 MYMKA6NI61 221 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 VWA5AO00534 786 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 MSH4O15457 936 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 ZSCAN12O43309 604 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 PPP1R12BO60237 982 aaPredicted RBP8.35□□□□□ -1.07
CTR9-202ENST00000524523 LYPLA2O95372 231 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 EYA4O95677 639 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CFBP00751 764 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 PLA2G4BP0C869 781 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 GAP43P17677 238 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 VCAM1P19320 739 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 INPP5BP32019 993 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 SLC12A3P55017 1021 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CCZ1BP86790 482 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CCZ1P86791 482 aaPredicted RBP8.35□□□□□ -1.07
CTR9-202ENST00000524523 RASSF7Q02833 373 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 PPP2R3AQ06190 1150 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 EPHA7Q15375 998 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 ANGEL2Q5VTE6 544 aaKnown RBP8.35□□□□□ -1.07
CTR9-202ENST00000524523 USP50Q70EL3 339 aaPredicted RBP8.35□□□□□ -1.07
CTR9-202ENST00000524523 CCDC84Q86UT8 332 aaPredicted RBP8.35□□□□□ -1.07
CTR9-202ENST00000524523 PPFIBP1Q86W92 1011 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CATSPER3Q86XQ3 398 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 PGBD3Q8N328 593 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 ZSCAN1Q8NBB4 408 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 TMEM174Q8WUU8 243 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CLEC4DQ8WXI8 215 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CEP63Q96MT8 703 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CNTNAP3BQ96NU0 1288 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 NACC1Q96RE7 527 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 TIPINQ9BVW5 301 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 CNTNAP3Q9BZ76 1288 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 EDEM3Q9BZQ6 932 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 NUCKS1Q9H1E3 243 aaKnown RBP8.35□□□□□ -1.07
CTR9-202ENST00000524523 VAV3Q9UKW4 847 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 UBIAD1Q9Y5Z9 338 aa8.35□□□□□ -1.07
CTR9-202ENST00000524523 ZNF541Q9H0D2 1346 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 LGALS16A8MUM7 142 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 KCNJ18B7U540 433 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 AKR1B15C9JRZ8 316 aaPredicted RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 CXCL11O14625 94 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 N4BP3O15049 544 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 DKC1O60832 514 aaKnown RBP eCLIP8.34□□□□□ -1.071e-8■■■■■ 52.3
CTR9-202ENST00000524523 FLOT1O75955 427 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 EGFRP00533 1210 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 SPATA31C1P0DKV0 1188 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 SCP2P22307 547 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 COPB1P53618 953 aaKnown RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 MARSP56192 900 aaKnown RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 FKBP3Q00688 224 aaKnown RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 PDE4CQ08493 712 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 STK4Q13043 487 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 SPP2Q13103 211 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 KCNJ12Q14500 433 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 KRT31Q15323 416 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 NFIL3Q16649 462 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 EDRF1Q3B7T1 1238 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 KLHL10Q6JEL2 608 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 ARMCX5Q6P1M9 558 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 LBX2Q6XYB7 198 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 CATSPERGQ6ZRH7 1159 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 IRF2BP1Q8IU81 584 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 MYOCDQ8IZQ8 938 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 CSGALNACT2Q8N6G5 542 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 SLC17A8Q8NDX2 589 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 NLGN2Q8NFZ4 835 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.34□□□□□ -1.07
CTR9-202ENST00000524523 LRRC15Q8TF66 581 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 STAMQ92783 540 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 DCPSQ96C86 337 aaKnown RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 CDHR1Q96JP9 859 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 ZNF830Q96NB3 372 aaPredicted RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 TRERF1Q96PN7 1200 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 WRNIP1Q96S55 665 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 P2RX7Q99572 595 aaKnown RBP8.34□□□□□ -1.07
CTR9-202ENST00000524523 TSG101Q99816 390 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 SENP7Q9BQF6 1050 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 JADE2Q9NQC1 790 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 OLFML3Q9NRN5 406 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 PANK4Q9NVE7 773 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 INTS13Q9NVM9 706 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 TMOD4Q9NZQ9 345 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 KCNG1Q9UIX4 513 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 ODF2LQ9ULJ1 636 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 KIAA1024Q9UPX6 916 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 CTNND2Q9UQB3 1225 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 AFG3L2Q9Y4W6 797 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 COL4A3BPQ9Y5P4 624 aa8.34□□□□□ -1.07
CTR9-202ENST00000524523 LOC102724159A0A0B4J2E5 919 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 A0A1W2PQJ5 194 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 SHTN1A0MZ66 631 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 FAM181BA6NEQ2 426 aa8.33□□□□□ -1.08
CTR9-202ENST00000524523 IPO5O00410 1097 aaKnown RBP8.33□□□□□ -1.08
CTR9-202ENST00000524523 GAS7O60861 476 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms