RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 XRCC6P12956 609 aaKnown RBP eCLIP23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 MCM7P33993 719 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 TXKP42681 527 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 DNM2P50570 870 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 TMEM62Q0P6H9 643 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 PAK2Q13177 524 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 NCAPH2Q6IBW4 605 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 SP7Q8TDD2 431 aaPredicted RBP23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 FAM161BQ96MY7 647 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 EIF2AK1Q9BQI3 630 aaKnown RBP23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 TSPYL2Q9H2G4 693 aaPredicted RBP23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 TMEM60Q9H2L4 133 aa23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 RNF216Q9NWF9 866 aaPredicted RBP23.4■■□□□ 1.34
TRAPPC9-215ENST00000524162 GPR182O15218 404 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 OR52Z1P0C646 297 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 MYOGP15173 224 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 CD52P31358 61 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 YWHABP31946 246 aaKnown RBP23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 RFC5P40937 340 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 RILPL1Q5EBL4 403 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 TRMT1LQ7Z2T5 733 aaKnown RBP23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 MYOCDQ8IZQ8 938 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 INTS4Q96HW7 963 aaKnown RBP23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 ADAMTS10Q9H324 1103 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 DHX33Q9H6R0 707 aaKnown RBP23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 ERVK-5Q9HDB9 667 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 PRUNE2Q8WUY3 3088 aa23.39■■□□□ 1.33
TRAPPC9-215ENST00000524162 EYSQ5T1H1 3165 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 RPS6KA5O75582 802 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 MUTP22033 750 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 CLCN3P51790 818 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 TAP1Q03518 808 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 MTERF2Q49AM1 385 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 CRIPAKQ8N1N5 446 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 C4orf32Q8N8J7 132 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 DYDC2Q96IM9 177 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 ANKEF1Q9NU02 776 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 RGL1Q9NZL6 768 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 WRAP73Q9P2S5 460 aaPredicted RBP23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 AKT3Q9Y243 479 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 RALGAPA2Q2PPJ7 1873 aa23.38■■□□□ 1.33
TRAPPC9-215ENST00000524162 VTNP04004 478 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 POU3F3P20264 500 aaPredicted RBP23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 PDCP20941 246 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 EIF4BP23588 611 aaKnown RBP23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 TOB1P50616 345 aaPredicted RBP23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 FXR2P51116 673 aaKnown RBP eCLIP23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 GPC3P51654 580 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 NLRP11P59045 1033 aaKnown RBP23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 PDIA5Q14554 519 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 KIZQ2M2Z5 673 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 ZNF410Q86VK4 478 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 LRRC71Q8N4P6 559 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 TMEM40Q8WWA1 233 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 SLC7A3Q8WY07 619 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 SUGCTQ9HAC7 445 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 TUFT1Q9NNX1 390 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 STK24Q9Y6E0 443 aa23.37■■□□□ 1.33
TRAPPC9-215ENST00000524162 H3BQV1 296 aa23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 ATP2B1P20020 1258 aa23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 PRPHP41219 470 aa23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 ZNF174Q15697 407 aa23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 GAS2L1Q99501 681 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 POLR3CQ9BUI4 534 aaPredicted RBP23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 CDHR5Q9HBB8 845 aa23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 C1orf112Q9NSG2 853 aa23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 NOC2LQ9Y3T9 749 aaKnown RBP23.36■■□□□ 1.33
TRAPPC9-215ENST00000524162 NLRC5Q86WI3 1866 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 FOSL2P15408 326 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 TMEM266Q2M3C6 531 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 LARP1BQ659C4 914 aaKnown RBP23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 RTN4RL1Q86UN2 441 aaPredicted RBP23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 TPH2Q8IWU9 490 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 ERMNQ8TAM6 284 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 MYLIPQ8WY64 445 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 SNX21Q969T3 373 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 CEP170P1Q96L14 293 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 SAMD11Q96NU1 681 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 OSMRQ99650 979 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 TMX1Q9H3N1 280 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 ST3GAL5Q9UNP4 418 aa23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 PRRC2BQ5JSZ5 2229 aaKnown RBP23.35■■□□□ 1.33
TRAPPC9-215ENST00000524162 A0A0C4DFX4 3053 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 TMEM150BA6NC51 233 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 POTEMA6NI47 508 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 DARSP14868 501 aaKnown RBP23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 RPA1P27694 616 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 ERVK-21P61565 698 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 CYP4A11Q02928 519 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 CTTNQ14247 550 aaKnown RBP23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 TMCO2Q7Z6W1 182 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 FAM228AQ86W67 206 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 TCP11Q8WWU5 503 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 LINC01599Q8WXQ3 324 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 RAB34Q9BZG1 259 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 INO80BQ9C086 356 aaPredicted RBP23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 RC3H2Q9HBD1 1191 aaKnown RBP23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 RGS18Q9NS28 235 aa23.34■■□□□ 1.33
TRAPPC9-215ENST00000524162 GINS2Q9Y248 185 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms