RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 ZBTB42B2RXF5 422 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 FUT2Q10981 343 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 ZNF668Q96K58 619 aaPredicted RBP29.44■■■□□ 2.3
PVT1-219ENST00000523427 TCF25Q9BQ70 676 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 CWH43Q9H720 699 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 TMEM161AQ9NX61 479 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 TCEAL9Q9UHQ7 104 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 EVPLQ92817 2033 aa29.44■■■□□ 2.3
PVT1-219ENST00000523427 IPO5O00410 1097 aaKnown RBP29.43■■■□□ 2.3
PVT1-219ENST00000523427 DHX15O43143 795 aaKnown RBP29.43■■■□□ 2.3
PVT1-219ENST00000523427 C22orf31O95567 290 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 LAG3P18627 525 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 PBX3P40426 434 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 PTPN5P54829 565 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 ZBTB33Q86T24 672 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 FBXL6Q8N531 539 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 RNF169Q8NCN4 708 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 CDCA3Q99618 268 aaPredicted RBP29.43■■■□□ 2.3
PVT1-219ENST00000523427 ZNF577Q9BSK1 485 aa29.43■■■□□ 2.3
PVT1-219ENST00000523427 PUF60Q9UHX1 559 aaKnown RBP29.43■■■□□ 2.3
PVT1-219ENST00000523427 FNDC1Q4ZHG4 1894 aaPredicted RBP29.42■■■□□ 2.3
PVT1-219ENST00000523427 CLK2P49760 499 aaKnown RBP29.42■■■□□ 2.3
PVT1-219ENST00000523427 CLCN3P51790 818 aa29.42■■■□□ 2.3
PVT1-219ENST00000523427 RNF20Q5VTR2 975 aa29.42■■■□□ 2.3
PVT1-219ENST00000523427 NIPA1Q7RTP0 329 aa29.42■■■□□ 2.3
PVT1-219ENST00000523427 SUSD6Q92537 303 aa29.42■■■□□ 2.3
PVT1-219ENST00000523427 KLF18A0A0U1RQI7 1052 aa29.41■■■□□ 2.3
PVT1-219ENST00000523427 FSCN2O14926 492 aa29.41■■■□□ 2.3
PVT1-219ENST00000523427 SRGAP2BP0DMP2 458 aa29.41■■■□□ 2.3
PVT1-219ENST00000523427 ATF7P17544 494 aaPredicted RBP29.41■■■□□ 2.3
PVT1-219ENST00000523427 SIGLEC14Q08ET2 396 aa29.41■■■□□ 2.3
PVT1-219ENST00000523427 PDE12Q6L8Q7 609 aaKnown RBP29.41■■■□□ 2.3
PVT1-219ENST00000523427 MRPS27Q92552 414 aaKnown RBP29.41■■■□□ 2.3
PVT1-219ENST00000523427 GLT8D2Q9H1C3 349 aa29.41■■■□□ 2.3
PVT1-219ENST00000523427 AKT3Q9Y243 479 aa29.41■■■□□ 2.3
PVT1-219ENST00000523427 HIDE1A8MVS5 230 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 hCG_1984214I3L0E3 225 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 ADAMTS3O15072 1205 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 GPR32O75388 356 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 CDC27P30260 824 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 FAM189BP81408 668 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 PKN1Q16512 942 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 ANKRD54Q6NXT1 300 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 LRRC55Q6ZSA7 311 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 ABI1Q8IZP0 508 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 ZNF713Q8N859 430 aaPredicted RBP29.4■■■□□ 2.3
PVT1-219ENST00000523427 BBXQ8WY36 941 aaPredicted RBP29.4■■■□□ 2.3
PVT1-219ENST00000523427 TMEM117Q9H0C3 514 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 TSHZ2Q9NRE2 1034 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 FAM86C1Q9NVL1 165 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 GABBR1Q9UBS5 961 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 SAMM50Q9Y512 469 aa29.4■■■□□ 2.3
PVT1-219ENST00000523427 IGLV3-22A0A075B6J6 115 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 CA8P35219 290 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 VCPP55072 806 aaKnown RBP29.39■■■□□ 2.3
PVT1-219ENST00000523427 NLRP11P59045 1033 aaKnown RBP29.39■■■□□ 2.3
PVT1-219ENST00000523427 EXOSC10Q01780 885 aaKnown RBP29.39■■■□□ 2.3
PVT1-219ENST00000523427 DSC3Q14574 896 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 KCNT2Q6UVM3 1135 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 DHX32Q7L7V1 743 aaKnown RBP29.39■■■□□ 2.3
PVT1-219ENST00000523427 TMC7Q7Z402 723 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 LRRC71Q8N4P6 559 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 S1PR5Q9H228 398 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 ELAC1Q9H777 363 aaKnown RBP29.39■■■□□ 2.3
PVT1-219ENST00000523427 CDH22Q9UJ99 828 aa29.39■■■□□ 2.3
PVT1-219ENST00000523427 MAFBQ9Y5Q3 323 aaPredicted RBP29.39■■■□□ 2.3
PVT1-219ENST00000523427 FSD2A1L4K1 749 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 PSAPP07602 524 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 ZSCAN20P17040 1043 aaPredicted RBP29.38■■■□□ 2.29
PVT1-219ENST00000523427 TCF15Q12870 199 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 SYCE2Q6PIF2 218 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 TEX2Q8IWB9 1127 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 ZNF558Q96NG5 402 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 CASD1Q96PB1 797 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 FAM217BQ9NTX9 383 aaPredicted RBP29.38■■■□□ 2.29
PVT1-219ENST00000523427 TBC1D22BQ9NU19 505 aa29.38■■■□□ 2.29
PVT1-219ENST00000523427 ADD1P35611 737 aaKnown RBP29.37■■■□□ 2.29
PVT1-219ENST00000523427 PLCB3Q01970 1234 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 PTPN21Q16825 1174 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 ADCK5Q3MIX3 580 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 PRR16Q569H4 304 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 EFCAB12Q6NXP0 572 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 MAP7D2Q96T17 732 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 RNF19AQ9NV58 838 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 LZTS1Q9Y250 596 aa29.37■■■□□ 2.29
PVT1-219ENST00000523427 CYP3A4P08684 503 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 FGD1P98174 961 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 KRT17Q04695 432 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 ZNF746Q6NUN9 644 aaPredicted RBP29.36■■■□□ 2.29
PVT1-219ENST00000523427 FAM43BQ6ZT52 329 aaPredicted RBP29.36■■■□□ 2.29
PVT1-219ENST00000523427 RASEFQ8IZ41 740 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 SCLT1Q96NL6 688 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 PRRX2Q99811 253 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 NGRNQ9NPE2 291 aaKnown RBP29.36■■■□□ 2.29
PVT1-219ENST00000523427 CEP131Q9UPN4 1083 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 PCDHA10Q9Y5I2 948 aa29.36■■■□□ 2.29
PVT1-219ENST00000523427 HOXA2O43364 376 aa29.35■■■□□ 2.29
PVT1-219ENST00000523427 KCNC3Q14003 757 aa29.35■■■□□ 2.29
PVT1-219ENST00000523427 PFKFB3Q16875 520 aaPredicted RBP29.35■■■□□ 2.29
PVT1-219ENST00000523427 TMEM184AQ6ZMB5 413 aa29.35■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms