RNA–Protein interactions for RNA: ENST00000523308.5

DENND3-221, Transcript of DENN domain containing 3, humanhuman

TSL 2 BASIC

Gene DENND3, Length 2,959 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-221ENST00000523308 APTXQ7Z2E3 356 aaKnown RBP13.56□□□□□ -0.24
DENND3-221ENST00000523308 DGLUCYQ7Z3D6 616 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 TMC4Q7Z404 712 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 ARHGAP18Q8N392 663 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 RASSF8Q8NHQ8 419 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 NAF1Q96HR8 494 aaKnown RBP13.56□□□□□ -0.24
DENND3-221ENST00000523308 CENPHQ9H3R5 247 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 OCEL1Q9H607 264 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 PARVGQ9HBI0 331 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 DACH1Q9UI36 760 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 XDHP47989 1333 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 TRIM49BA6NDI0 452 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 TSPY2A6NKD2 308 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 RASSF9O75901 435 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 KCNJ6P48051 423 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 PDE6CP51160 858 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 SNX16P57768 344 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 PLEKHG6Q3KR16 790 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 FAM20CQ8IXL6 584 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 NPLOC4Q8TAT6 608 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 RTL9Q8NET4 1388 aa13.56□□□□□ -0.24
DENND3-221ENST00000523308 CICQ96RK0 1608 aaPredicted RBP13.55□□□□□ -0.24
DENND3-221ENST00000523308 PPP1R3GB7ZBB8 358 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 STX10O60499 249 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 GKAP1Q5VSY0 366 aaPredicted RBP13.55□□□□□ -0.24
DENND3-221ENST00000523308 TMTC3Q6ZXV5 915 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 SIX5Q8N196 739 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 RNF10Q8N5U6 811 aaKnown RBP13.55□□□□□ -0.24
DENND3-221ENST00000523308 SLC44A5Q8NCS7 719 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 MCM9Q9NXL9 1143 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 WDR35Q9P2L0 1181 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 DOCK2Q92608 1830 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 CNTNAP5Q8WYK1 1306 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 A0A1B0GTH6 734 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 ABLIM1O14639 778 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 N4BP3O15049 544 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 MUSKO15146 869 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 PDHBP11177 359 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 ACAP1Q15027 740 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 SKIDA1Q1XH10 827 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 EXOC3L1Q86VI1 746 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 ZNF579Q8NAF0 562 aaKnown RBP13.55□□□□□ -0.24
DENND3-221ENST00000523308 EIF2AQ9BY44 585 aaKnown RBP13.55□□□□□ -0.24
DENND3-221ENST00000523308 FKBP14Q9NWM8 211 aa13.55□□□□□ -0.24
DENND3-221ENST00000523308 FAM205AQ6ZU69 1335 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 PRPF3O43395 683 aaKnown RBP13.54□□□□□ -0.24
DENND3-221ENST00000523308 DIAPH2O60879 1101 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 GOLGA8HP0CJ92 632 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 MSLNQ13421 630 aaPredicted RBP13.54□□□□□ -0.24
DENND3-221ENST00000523308 ZNF569Q5MCW4 686 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 SPATA1Q5VX52 437 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 TBC1D9BQ66K14 1250 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 NEPROQ6NW34 567 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 KIFC2Q96AC6 838 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 POLMQ9NP87 494 aaPredicted RBP13.54□□□□□ -0.24
DENND3-221ENST00000523308 DCP1AQ9NPI6 582 aaPredicted RBP13.54□□□□□ -0.24
DENND3-221ENST00000523308 MTUS1Q9ULD2 1270 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 LZTS1Q9Y250 596 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 USP17L3A6NCW0 530 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 USP17L4A6NCW7 530 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 M0QX08 132 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 CES1P23141 567 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 PIP4K2BP78356 416 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 TAF1CQ15572 869 aaPredicted RBP13.54□□□□□ -0.24
DENND3-221ENST00000523308 FAM209AQ5JX71 171 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 USP17L1Q7RTZ2 530 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 PSKH2Q96QS6 385 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 CLK4Q9HAZ1 481 aaKnown RBP13.54□□□□□ -0.24
DENND3-221ENST00000523308 CASS4Q9NQ75 786 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 ZNF180Q9UJW8 692 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 EP400Q96L91 3159 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 DOT1LQ8TEK3 1739 aa13.54□□□□□ -0.24
DENND3-221ENST00000523308 A0A1W2PQ67 120 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 B4GALT4O60513 344 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 GYPCP04921 128 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 GZMAP12544 262 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 CCT5P48643 541 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 CTCFP49711 727 aaPredicted RBP13.53□□□□□ -0.24
DENND3-221ENST00000523308 KRT31Q15323 416 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 DIXDC1Q155Q3 683 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 MAPRE1Q15691 268 aaKnown RBP13.53□□□□□ -0.24
DENND3-221ENST00000523308 WHAMMP3Q1A5X7 153 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 FAM228AQ86W67 206 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 GALNT6Q8NCL4 622 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 LINC00116Q8NCU8 138 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 SPATA20Q8TB22 786 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 CCDC110Q8TBZ0 833 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 GLMNQ92990 594 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 NSUN4Q96CB9 384 aaKnown RBP13.53□□□□□ -0.24
DENND3-221ENST00000523308 C8orf37Q96NL8 207 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 TRIM10Q9UDY6 481 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
DENND3-221ENST00000523308 IVNS1ABPQ9Y6Y0 642 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 GTPBP10A4D1E9 387 aaKnown RBP13.53□□□□□ -0.24
DENND3-221ENST00000523308 LRRC72A6NJI9 287 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 RPN1P04843 607 aaKnown RBP13.53□□□□□ -0.24
DENND3-221ENST00000523308 GPSM2P81274 684 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 CCDC38Q502W7 563 aa13.53□□□□□ -0.24
DENND3-221ENST00000523308 TYW1BQ6NUM6 668 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms