RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 CAPN11Q9UMQ6 739 aa10.67□□□□□ -0.7
SPARC-205ENST00000522348 LUC7L2Q9Y383 392 aaKnown RBP10.67□□□□□ -0.7
SPARC-205ENST00000522348 IVNS1ABPQ9Y6Y0 642 aa10.67□□□□□ -0.7
SPARC-205ENST00000522348 RBBP6Q7Z6E9 1792 aaKnown RBP10.67□□□□□ -0.7
SPARC-205ENST00000522348 SYNGAP1Q96PV0 1343 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 COL11A1P12107 1806 aaPredicted RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 MANSC4A6NHS7 340 aaPredicted RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 SLC16A3O15427 465 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 ZSCAN12O43309 604 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 ZNF862O60290 1169 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 USO1O60763 962 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 MFAP3LO75121 409 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 NR3C1P04150 777 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 GYPCP04921 128 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 SCP2P22307 547 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 NPEPPSP55786 919 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 HUNKP57058 714 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 RTP1P59025 263 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 GTF2BQ00403 316 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 ZNF792Q3KQV3 632 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 ZC2HC1CQ53FD0 456 aaPredicted RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 DNTTIP2Q5QJE6 756 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 FAM102BQ5T8I3 360 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 UTP14CQ5TAP6 766 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 METTL7BQ6UX53 244 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 PAXIP1Q6ZW49 1069 aaPredicted RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 ZNF467Q7Z7K2 595 aaPredicted RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 TRIM59Q8IWR1 403 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 EXOC8Q8IYI6 725 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 SYCP3Q8IZU3 236 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 DAW1Q8N136 415 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 ANKRD13CQ8N6S4 541 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 MCPH1Q8NEM0 835 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 OR8K1Q8NGG5 319 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 TMEM174Q8WUU8 243 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 SPIRE2Q8WWL2 714 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 EEF2KMTQ96G04 330 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 NIFKQ9BYG3 293 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 GBP3Q9H0R5 595 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 EFCC1Q9HA90 598 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 ZCCHC17Q9NP64 241 aaKnown RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 PDLIM7Q9NR12 457 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 CYP26B1Q9NR63 512 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 ARMCX3Q9UH62 379 aaPredicted RBP10.66□□□□□ -0.7
SPARC-205ENST00000522348 EXOC7Q9UPT5 735 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 PPME1Q9Y570 386 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.66□□□□□ -0.7
SPARC-205ENST00000522348 A0A0G2JMZ2 1700 aa10.66□□□□□ -0.7
SPARC-205ENST00000522348 PTPRFP10586 1907 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 A0A1W2PQJ5 194 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 GSTTP1A0A1W2PQM5 241 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 H0YCG3 227 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 KIF2AO00139 706 aaPredicted RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 TGFB1I1O43294 461 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 FARP2O94887 1054 aaPredicted RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 GGPS1O95749 300 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 EPB41P11171 864 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 TRIM21P19474 475 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 UBA1P22314 1058 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 MAPK4P31152 587 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 KRT9P35527 623 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 PSMC2P35998 433 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 STAT5BP51692 787 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 NCKAP1LP55160 1127 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 SP4Q02446 784 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 TTLL4Q14679 1199 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 SYCP1Q15431 976 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 CELF3Q5SZQ8 465 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 CEP135Q66GS9 1140 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 CYP26C1Q6V0L0 522 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 MAEAQ7L5Y9 396 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 HAUS6Q7Z4H7 955 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 SLC9A9Q8IVB4 645 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 CCDC60Q8IWA6 550 aaPredicted RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 C17orf53Q8N3J3 647 aaPredicted RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 AFAP1L1Q8TED9 768 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 HVCN1Q96D96 273 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 FGD4Q96M96 766 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 MKNK1Q9BUB5 465 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 PORCNQ9H237 461 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 R3HDMLQ9H3Y0 253 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 AZI2Q9H6S1 392 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 CREBZFQ9NS37 354 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 ZNHIT6Q9NWK9 470 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 SLC5A4Q9NY91 659 aa10.65□□□□□ -0.7
SPARC-205ENST00000522348 DIS3Q9Y2L1 958 aaKnown RBP10.65□□□□□ -0.7
SPARC-205ENST00000522348 PASKQ96RG2 1323 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 IGSF9BQ9UPX0 1349 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 TTC26A0AVF1 554 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 GOLGA6L9A6NEM1 432 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 K7ENM7 598 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 PPP1R37O75864 691 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 OATP04181 439 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 TXNP10599 105 aaKnown RBP10.64□□□□□ -0.71
SPARC-205ENST00000522348 FECHP22830 423 aa10.64□□□□□ -0.71
SPARC-205ENST00000522348 FXR1P51114 621 aaKnown RBP eCLIP10.64□□□□□ -0.71
SPARC-205ENST00000522348 ZNF157P51786 506 aaPredicted RBP10.64□□□□□ -0.71
SPARC-205ENST00000522348 PEX3P56589 373 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms