RNA–Protein interactions for RNA: ENST00000522321.5

SPIDR-219, Transcript of scaffold protein involved in DNA repair, human

TSL 4

Gene SPIDR, Length 760 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-219	ENST00000522321	CACNB1	Q02641	598 aa	Predicted RBP	13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	DPYD	Q12882	1025 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	GRIK4	Q16099	956 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	KCNA10	Q16322	511 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	UNC13D	Q70J99	1090 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	KLHDC9	Q8NEP7	349 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	ARMC5	Q96C12	935 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	REEP2	Q9BRK0	252 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	KIAA1468	Q9P260	1216 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	ODF2L	Q9ULJ1	636 aa		13.65	□□□□□ -0.22
SPIDR-219	ENST00000522321	NPHP3-ACAD11	A0A0J9YXS1	232 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	C17orf102	A2RUQ5	167 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	RRN3P2	A6NIE6	340 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	DNM1L	O00429	736 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	BIN1	O00499	593 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	GAS2	O43903	313 aa	Known RBP	13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	SMIM10L2A	P0DMW4	78 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	SMIM10L2B	P0DMW5	78 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	INSRR	P14616	1297 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	GAP43	P17677	238 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	DNM2	P50570	870 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	LHX8	Q68G74	356 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	CNNM4	Q6P4Q7	775 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	METTL13	Q8N6R0	699 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	TCP11	Q8WWU5	503 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	KIFAP3	Q92845	792 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	GSDMA	Q96QA5	445 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	TSEN34	Q9BSV6	310 aa	Known RBP	13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	RNPEP	Q9H4A4	650 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	PARVG	Q9HBI0	331 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	PANK4	Q9NVE7	773 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	PCDHA5	Q9Y5H7	936 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	COL4A3BP	Q9Y5P4	624 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	DOCK3	Q8IZD9	2030 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	NRCAM	Q92823	1304 aa		13.64	□□□□□ -0.23
SPIDR-219	ENST00000522321	PVALEF	A0A1B0GWK0	134 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	MAGEB2	O15479	319 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	HIP1R	O75146	1068 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	STBD1	O95210	358 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	TFRC	P02786	760 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	CCDC192	P0DO97	292 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	TMOD1	P28289	359 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	ACLY	P53396	1101 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	COASY	Q13057	564 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	DMP1	Q13316	513 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	STX1A	Q16623	288 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	KMT5B	Q4FZB7	885 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	HERC4	Q5GLZ8	1057 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	L1TD1	Q5T7N2	865 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	C1orf186	Q6ZWK4	172 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	MYCT1	Q8N699	235 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	TRIML1	Q8N9V2	468 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	TRAPPC12	Q8WVT3	735 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	KAT2B	Q92831	832 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	IFT74	Q96LB3	600 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	MAP7D2	Q96T17	732 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	GTPBP4	Q9BZE4	634 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	POLR3F	Q9H1D9	316 aa	Predicted RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	SUGCT	Q9HAC7	445 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	STARD7	Q9NQZ5	370 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	LARS	Q9P2J5	1176 aa	Known RBP	13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	DACH1	Q9UI36	760 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	TUBE1	Q9UJT0	475 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	NOD1	Q9Y239	953 aa		13.63	□□□□□ -0.23
SPIDR-219	ENST00000522321	DOCK5	Q9H7D0	1870 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	MAF	O75444	373 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	MDM2	Q00987	491 aa	Predicted RBP	13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	STIM1	Q13586	685 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	GIT2	Q14161	759 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	KCNB1	Q14721	858 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	ARSH	Q5FYA8	562 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	RBM43	Q6ZSC3	357 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	STXBP4	Q6ZWJ1	553 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	U2AF1L4	Q8WU68	220 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	LMBR1	Q8WVP7	490 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	SCLT1	Q96NL6	688 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	DHX33	Q9H6R0	707 aa	Known RBP	13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	SETD4	Q9NVD3	440 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	ANO10	Q9NW15	660 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	SEL1L	Q9UBV2	794 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321	MAN1B1	Q9UKM7	699 aa		13.62	□□□□□ -0.23
SPIDR-219	ENST00000522321		A0A0U1RQG5	324 aa	Predicted RBP	13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321		A0A1W2PQ45	241 aa	Predicted RBP	13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321		A0A1W2PQY0	241 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	RSPH10B2	B2RC85	870 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321		K7ENM7	598 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	HAS3	O00219	553 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	KIF20A	O95235	890 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	C22orf31	O95567	290 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	GJB1	P08034	283 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	RSPH10B	P0C881	870 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	SMTN	P53814	917 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	TYRO3	Q06418	890 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	PPP2R5A	Q15172	486 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	TARBP2	Q15633	366 aa	Known RBP	13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	NBPF20	Q3BBV1	942 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	FAM26F	Q5R3K3	315 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	ODR4	Q5SWX8	454 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	ISM2	Q6H9L7	571 aa		13.61	□□□□□ -0.23
SPIDR-219	ENST00000522321	NFRKB	Q6P4R8	1299 aa		13.61	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms