RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 ALCAMQ13740 583 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 STXBP2Q15833 593 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 XKR9Q5GH70 373 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 PNMA8AQ86V59 439 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 GOLGA5Q8TBA6 731 aa20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 ZNF215Q9UL58 517 aaPredicted RBP20.29■□□□□ 0.84
TRAPPC9-210ENST00000521667 EIF3CLB5ME19 914 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 DKC1O60832 514 aaKnown RBP eCLIP20.28■□□□□ 0.844e-7■■■■■ 45.2
TRAPPC9-210ENST00000521667 URI1O94763 535 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 CNTN2Q02246 1040 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 PDXDC1Q6P996 788 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 ATP6V0A1Q93050 837 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 DRC1Q96MC2 740 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 EIF3CQ99613 913 aaKnown RBP20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 SH2D3AQ9BRG2 576 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 CRACR2AQ9BSW2 395 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 ASCC2Q9H1I8 757 aaPredicted RBP20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 RRAGCQ9HB90 399 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 AGPAT3Q9NRZ7 376 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 GABBR1Q9UBS5 961 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 SLC9A2Q9UBY0 812 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 AGTPBP1Q9UPW5 1226 aa20.28■□□□□ 0.84
TRAPPC9-210ENST00000521667 EIF3JO75822 258 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 NOL4O94818 638 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 PSAPP07602 524 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 PSMC2P35998 433 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 PLA2G4FQ68DD2 849 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 ERO1AQ96HE7 468 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 MKNK1Q9BUB5 465 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 IPO7O95373 1038 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 ALDH5A1P51649 535 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 NPEPPSP55786 919 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 HERVK_113P62684 666 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 DCAF17Q5H9S7 520 aaPredicted RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 ANO5Q75V66 913 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 OTUD6AQ7L8S5 288 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 TRMT1LQ7Z2T5 733 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 NCAPG2Q86XI2 1143 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 BORCS6Q96GS4 357 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 CCDC42Q96M95 316 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 NUCKS1Q9H1E3 243 aaKnown RBP20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 DMAC2Q9NW81 257 aa20.27■□□□□ 0.84
TRAPPC9-210ENST00000521667 ICAM3P32942 547 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ARMC9Q7Z3E5 817 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 FAM186BQ8IYM0 893 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 SYCP3Q8IZU3 236 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 SLC35C1Q96A29 364 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 OPTNQ96CV9 577 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 PAGR1Q9BTK6 254 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 HAUS4Q9H6D7 363 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 TMEM206Q9H813 350 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ARHGAP20Q9P2F6 1191 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 MYO1AQ9UBC5 1043 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ABL1P00519 1130 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ACTR2P61160 394 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ZNF569Q5MCW4 686 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 TCERG1LQ5VWI1 586 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ZNF662Q6ZS27 426 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 ZNF408Q9H9D4 720 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 NLRC4Q9NPP4 1024 aa20.26■□□□□ 0.83
TRAPPC9-210ENST00000521667 POTEB2H3BUK9 544 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 ZNF862O60290 1169 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 CNMDO75829 334 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 POLR2FP61218 127 aaKnown RBP20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 RBM10P98175 930 aaKnown RBP20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 MYBPC2Q14324 1141 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 SWSAP1Q6NVH7 229 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 ABHD15Q6UXT9 468 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 SLC9A9Q8IVB4 645 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 SYN2Q92777 582 aaPredicted RBP20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 ST6GALNAC4Q9H4F1 302 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 LCTP09848 1927 aa20.25■□□□□ 0.83
TRAPPC9-210ENST00000521667 STBD1O95210 358 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 PLEKP08567 350 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 SP4Q02446 784 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 NCBP1Q09161 790 aaKnown RBP20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 FSTL1Q12841 308 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 MOGSQ13724 837 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 FAM102BQ5T8I3 360 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 MIS18BP1Q6P0N0 1132 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 ACCSQ96QU6 501 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 GANQ9H2C0 597 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 PLCB1Q9NQ66 1216 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 GPRC5CQ9NQ84 441 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 FRMD4BQ9Y2L6 1034 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 TELO2Q9Y4R8 837 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 SLC25A27O95847 323 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 CYP2J2P51589 502 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 SP2Q02086 613 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 EXOC3L4Q17RC7 722 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 FASTKD5Q7L8L6 764 aaKnown RBP20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 KIAA1328Q86T90 577 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 CCDC60Q8IWA6 550 aaPredicted RBP20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 ZNF710Q8N1W2 664 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 SLC17A8Q8NDX2 589 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 CEP170P1Q96L14 293 aa20.24■□□□□ 0.83
TRAPPC9-210ENST00000521667 SOWAHBA6NEL2 793 aa20.23■□□□□ 0.83
TRAPPC9-210ENST00000521667 EDNRBP24530 442 aa20.23■□□□□ 0.83
TRAPPC9-210ENST00000521667 EIF4A3P38919 411 aaKnown RBP20.23■□□□□ 0.83
TRAPPC9-210ENST00000521667 NCKAP1LP55160 1127 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms