RNA–Protein interactions for RNA: ENST00000521331.5

PRKDC-204, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-204ENST00000521331 USP15Q9Y4E8 981 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-204ENST00000521331 PCDHGC5Q9Y5F6 944 aa16.89■□□□□ 0.29
PRKDC-204ENST00000521331 MAFBQ9Y5Q3 323 aaPredicted RBP16.89■□□□□ 0.29
PRKDC-204ENST00000521331 PSAPP07602 524 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 SRGAP2BP0DMP2 458 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 LAG3P18627 525 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 CDC27P30260 824 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 MRE11P49959 708 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 FAM189BP81408 668 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 CBX2Q14781 532 aaPredicted RBP16.88■□□□□ 0.29
PRKDC-204ENST00000521331 PKN1Q16512 942 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 BMP8AQ7Z5Y6 402 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 FAM228AQ86W67 206 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 REXO1Q8N1G1 1221 aaKnown RBP16.88■□□□□ 0.29
PRKDC-204ENST00000521331 ZNF710Q8N1W2 664 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 METTL13Q8N6R0 699 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 OSMRQ99650 979 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 ZMYND12Q9H0C1 365 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 C6orf50Q9HD87 102 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 TYW1Q9NV66 732 aaKnown RBP16.88■□□□□ 0.29
PRKDC-204ENST00000521331 NAP1L2Q9ULW6 460 aaPredicted RBP16.88■□□□□ 0.29
PRKDC-204ENST00000521331 LZTS1Q9Y250 596 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 PCDHA10Q9Y5I2 948 aa16.88■□□□□ 0.29
PRKDC-204ENST00000521331 FSCN2O14926 492 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 MAGEB2O15479 319 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 HOXA2O43364 376 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 GPR32O75388 356 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 ATF7P17544 494 aaPredicted RBP16.87■□□□□ 0.29
PRKDC-204ENST00000521331 METAP2P50579 478 aaKnown RBP eCLIP16.87■□□□□ 0.29
PRKDC-204ENST00000521331 FGD1P98174 961 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 DSC3Q14574 896 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 DUSP6Q16828 381 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 ADCK5Q3MIX3 580 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 TRIM67Q6ZTA4 783 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 RASEFQ8IZ41 740 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 FAM167AQ96KS9 214 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 PPP1R16BQ96T49 567 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 TMEM117Q9H0C3 514 aa16.87■□□□□ 0.29
PRKDC-204ENST00000521331 PUF60Q9UHX1 559 aaKnown RBP16.87■□□□□ 0.29
PRKDC-204ENST00000521331 PER2O15055 1255 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 VTNP04004 478 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 FGFR1P11362 822 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 TMOD1P28289 359 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 GNA11P29992 359 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 ADD1P35611 737 aaKnown RBP16.86■□□□□ 0.29
PRKDC-204ENST00000521331 ERVFC1P60507 584 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 ZXDAP98168 799 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 PLCB3Q01970 1234 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 SUSD6Q92537 303 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 MAP7D2Q96T17 732 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 CWH43Q9H720 699 aa16.86■□□□□ 0.29
PRKDC-204ENST00000521331 ZNF318Q5VUA4 2279 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 TMEM221A6NGB7 291 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 M0R296 226 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 CIITAP33076 1130 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 PPM1AP35813 382 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 PRR16Q569H4 304 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 TMEM184AQ6ZMB5 413 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 LRRC43Q8N309 656 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 VN1R2Q8NFZ6 395 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 BICD2Q8TD16 824 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 RASGRP4Q8TDF6 673 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 MRPS27Q92552 414 aaKnown RBP16.85■□□□□ 0.29
PRKDC-204ENST00000521331 PBXIP1Q96AQ6 731 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 PRRX2Q99811 253 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 NGRNQ9NPE2 291 aaKnown RBP16.85■□□□□ 0.29
PRKDC-204ENST00000521331 HCSTQ9UBK5 93 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 AKT3Q9Y243 479 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 TECTAO75443 2155 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 C5orf42Q9H799 3197 aa16.85■□□□□ 0.29
PRKDC-204ENST00000521331 KIAA1671Q9BY89 1806 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 ZSCAN20P17040 1043 aaPredicted RBP16.84■□□□□ 0.29
PRKDC-204ENST00000521331 CLCN3P51790 818 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 NLRP11P59045 1033 aaKnown RBP16.84■□□□□ 0.29
PRKDC-204ENST00000521331 PLPP4Q5VZY2 271 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 EFCAB12Q6NXP0 572 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 TRMT1LQ7Z2T5 733 aaKnown RBP16.84■□□□□ 0.29
PRKDC-204ENST00000521331 SUGP1Q8IWZ8 645 aaKnown RBP16.84■□□□□ 0.29
PRKDC-204ENST00000521331 ABI1Q8IZP0 508 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 LINC01465Q8N7H1 131 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 RPGRIP1Q96KN7 1286 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 CASD1Q96PB1 797 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 TCF25Q9BQ70 676 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 ENTPD7Q9NQZ7 604 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 SAMM50Q9Y512 469 aa16.84■□□□□ 0.29
PRKDC-204ENST00000521331 PRPF3O43395 683 aaKnown RBP16.83■□□□□ 0.28
PRKDC-204ENST00000521331 EIF4BP23588 611 aaKnown RBP16.83■□□□□ 0.28
PRKDC-204ENST00000521331 RBM10P98175 930 aaKnown RBP16.83■□□□□ 0.28
PRKDC-204ENST00000521331 AKAP17AQ02040 695 aaKnown RBP16.83■□□□□ 0.28
PRKDC-204ENST00000521331 KRT17Q04695 432 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 APOBRQ0VD83 1088 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 KCNC3Q14003 757 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 NID2Q14112 1375 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 KCNT2Q6UVM3 1135 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 CCDC148Q8NFR7 591 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 ZNF558Q96NG5 402 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 ADAMTS10Q9H324 1103 aa16.83■□□□□ 0.28
PRKDC-204ENST00000521331 NRBP2Q9NSY0 501 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms