RNA–Protein interactions for RNA: ENST00000520909.5

CLK4-207, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,305 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-207ENST00000520909 PRAMEF22A3QJZ6 481 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 APPP05067 770 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 GABREP78334 506 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 SEC23AQ15436 765 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 FAM209AQ5JX71 171 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 HIPK4Q8NE63 616 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 ASB15Q8WXK1 588 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 GBP4Q96PP9 640 aa6.42□□□□□ -1.38
CLK4-207ENST00000520909 HECAQ9UBI9 543 aaPredicted RBP6.42□□□□□ -1.38
CLK4-207ENST00000520909 A0A1W2PRX2 142 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 SCDO00767 359 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 ADCY3O60266 1144 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 C6orf222P0C671 652 aaPredicted RBP6.41□□□□□ -1.38
CLK4-207ENST00000520909 RIN1Q13671 783 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 ZBTB38Q8NAP3 1195 aaPredicted RBP6.41□□□□□ -1.38
CLK4-207ENST00000520909 CALML6Q8TD86 181 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 RABGGTAQ92696 567 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 LPPQ93052 612 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 AGAP2Q99490 1192 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 WDR26Q9H7D7 661 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 VWA7Q9Y334 891 aa6.41□□□□□ -1.38
CLK4-207ENST00000520909 EIF4G1Q04637 1599 aaKnown RBP6.4□□□□□ -1.38
CLK4-207ENST00000520909 PDPK1O15530 556 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 CRTAMO95727 393 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 MAP3K12Q12852 859 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 TTPALQ9BTX7 342 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 KCNH7Q9NS40 1196 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 SH3BP1Q9Y3L3 701 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 ASB1Q9Y576 335 aa6.4□□□□□ -1.39
CLK4-207ENST00000520909 WIZO95785 1651 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 FOXP2O15409 715 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 APEX1P27695 318 aaKnown RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 SESN2P58004 480 aaPredicted RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 ATP2C1P98194 919 aaPredicted RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 SSRP1Q08945 709 aaKnown RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 ADAM15Q13444 863 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 CNGB1Q14028 1251 aaPredicted RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 MTERF2Q49AM1 385 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 FOXB2Q5VYV0 432 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 ZNF662Q6ZS27 426 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 GSPT2Q8IYD1 628 aaKnown RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 PFDN2Q9UHV9 154 aa6.39□□□□□ -1.39
CLK4-207ENST00000520909 CTDP1Q9Y5B0 961 aaPredicted RBP6.39□□□□□ -1.39
CLK4-207ENST00000520909 TMEM191CA6NGB0 347 aa6.38□□□□□ -1.39
CLK4-207ENST00000520909 GOLGA6L22H0YM25 854 aa6.38□□□□□ -1.39
CLK4-207ENST00000520909 CISD2Q8N5K1 135 aaKnown RBP6.38□□□□□ -1.39
CLK4-207ENST00000520909 MIEF2Q96C03 454 aa6.38□□□□□ -1.39
CLK4-207ENST00000520909 ATAD2BQ9ULI0 1458 aa6.38□□□□□ -1.39
CLK4-207ENST00000520909 MSRB2Q9Y3D2 182 aa6.38□□□□□ -1.39
CLK4-207ENST00000520909 FOXN1O15353 648 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 H2AFYO75367 372 aaKnown RBP6.37□□□□□ -1.39
CLK4-207ENST00000520909 ADCY7P51828 1080 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 RASGRF1Q13972 1273 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 DPY19L2P1Q6NXN4 242 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 KLHDC10Q6PID8 442 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 PCSK4Q6UW60 755 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 NOSTRINQ8IVI9 506 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 CKAP2LQ8IYA6 745 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 DHRS4Q9BTZ2 278 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 SLC6A15Q9H2J7 730 aa6.37□□□□□ -1.39
CLK4-207ENST00000520909 SMARCA2P51531 1590 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 MAFO75444 373 aaPredicted RBP6.36□□□□□ -1.39
CLK4-207ENST00000520909 SDHAP31040 664 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 SCNN1GP51170 649 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 ZC3H6P61129 1189 aaKnown RBP6.36□□□□□ -1.39
CLK4-207ENST00000520909 SAFB2Q14151 953 aaKnown RBP eCLIP6.36□□□□□ -1.39
CLK4-207ENST00000520909 TMEM132BQ14DG7 1078 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 LAIR1Q6GTX8 287 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 GFM2Q969S9 779 aaKnown RBP6.36□□□□□ -1.39
CLK4-207ENST00000520909 CCDC113Q9H0I3 377 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 B3GALT1Q9Y5Z6 326 aa6.36□□□□□ -1.39
CLK4-207ENST00000520909 RASSF10A6NK89 507 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 GOLGA8BA8MQT2 603 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 STK10O94804 968 aaKnown RBP6.35□□□□□ -1.39
CLK4-207ENST00000520909 FAM153BP0C7A2 387 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 KRT4P19013 534 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 STAT3P40763 770 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 MAN2A2P49641 1150 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 SLC25A3Q00325 362 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 TM4SF20Q53R12 229 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 Q6ZRM9 215 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 BCL6BQ8N143 479 aaPredicted RBP6.35□□□□□ -1.39
CLK4-207ENST00000520909 DLG3Q92796 817 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 GCDHQ92947 438 aaPredicted RBP6.35□□□□□ -1.39
CLK4-207ENST00000520909 SLC7A6OSQ96CW6 309 aaPredicted RBP6.35□□□□□ -1.39
CLK4-207ENST00000520909 EXOC2Q96KP1 924 aa6.35□□□□□ -1.39
CLK4-207ENST00000520909 SAE1Q9UBE0 346 aaPredicted RBP6.35□□□□□ -1.39
CLK4-207ENST00000520909 BAZ1BQ9UIG0 1483 aaKnown RBP6.35□□□□□ -1.39
CLK4-207ENST00000520909 SLC12A8A0AV02 714 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 EFCAB14O75071 495 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 HIP1RO75146 1068 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 RPS6KA4O75676 772 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 PTGS2P35354 604 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 ACAP1Q15027 740 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 LONRF2Q1L5Z9 754 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 FAM111BQ6SJ93 734 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 Q6ZPA2 131 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 HAS1Q92839 578 aa6.34□□□□□ -1.39
CLK4-207ENST00000520909 ERCC4Q92889 916 aaPredicted RBP6.34□□□□□ -1.39
CLK4-207ENST00000520909 RPL10LQ96L21 214 aaKnown RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms