RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 VSNL1P62760 191 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 MYL7Q01449 175 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 HDXQ7Z353 690 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 FRMD5Q7Z6J6 570 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 ADAT2Q7Z6V5 191 aaKnown RBP12.4□□□□□ -0.42
CLK4-206ENST00000520878 PACSIN1Q9BY11 444 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 VPS18Q9P253 973 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 HYOU1Q9Y4L1 999 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 LY75O60449 1722 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 ECM29Q5VYK3 1845 aa12.4□□□□□ -0.42
CLK4-206ENST00000520878 A0A1W2PQJ5 194 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 NFKBIEO00221 500 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 PIK3CDO00329 1044 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 CYP3A4P08684 503 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 LLGL1Q15334 1064 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 SULF1Q8IWU6 871 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 SLC5A5Q92911 643 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 PNKPQ96T60 521 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 MTFR1LQ9H019 292 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 KCTD10Q9H3F6 313 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 UBE2TQ9NPD8 197 aaPredicted RBP12.39□□□□□ -0.43
CLK4-206ENST00000520878 PPP1R9AQ9ULJ8 1098 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 CSADQ9Y600 493 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 ATP9AO75110 1047 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 IRX3P78415 501 aaPredicted RBP12.39□□□□□ -0.43
CLK4-206ENST00000520878 PTK2Q05397 1052 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 MEA1Q16626 185 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 HYIQ5T013 277 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 FKBP1CQ5VVH2 108 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 COG1Q8WTW3 980 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 POMGNT1Q8WZA1 660 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 ELMO3Q96BJ8 720 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 MS4A14Q96JA4 679 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 PDE11AQ9HCR9 933 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 ZNF446Q9NWS9 450 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 RIPK3Q9Y572 518 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 ZNF263O14978 683 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 H2AFZP0C0S5 128 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 KRT5P13647 590 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 H2AFXP16104 143 aaPredicted RBP12.39□□□□□ -0.43
CLK4-206ENST00000520878 ZSCAN20P17040 1043 aaPredicted RBP12.39□□□□□ -0.43
CLK4-206ENST00000520878 BACE1P56817 501 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 BRD3Q15059 726 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 RPS6KA1Q15418 735 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 C8orf74Q6P047 294 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 H2AFVQ71UI9 128 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 CYFIP1Q7L576 1253 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 HAUS6Q7Z4H7 955 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 KMT5AQ9NQR1 393 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 TBC1D22BQ9NU19 505 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 CLEC11AQ9Y240 323 aa12.39□□□□□ -0.43
CLK4-206ENST00000520878 WDR64B1ANS9 1081 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 HNRNPDLO14979 420 aaKnown RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 KLRC1P26715 233 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 LMAN1P49257 510 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 DMP1Q13316 513 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 BIRC3Q13489 604 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 EAPPQ56P03 285 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 OTUD6AQ7L8S5 288 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 DAAM2Q86T65 1068 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 WNK4Q96J92 1243 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 ACCSQ96QU6 501 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 RIT2Q99578 217 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 WRAP73Q9P2S5 460 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 USP20Q9Y2K6 914 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 CCDC151A5D8V7 595 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 PON1P27169 355 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 CCND2P30279 289 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 DRAP1Q14919 205 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 SUPT20HL1Q3ZLR7 823 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 NAA35Q5VZE5 725 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 C1orf186Q6ZWK4 172 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 ZNF720Q7Z2F6 126 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 PEX26Q7Z412 305 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 GLYCTKQ8IVS8 523 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 CTNNBL1Q8WYA6 563 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 IFT74Q96LB3 600 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 KIAA1683Q9H0B3 1180 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 SBF2Q86WG5 1849 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 LRRIQ4A6NIV6 560 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 CCDC172P0C7W6 258 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 KCTD19Q17RG1 926 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 GNPTABQ3T906 1256 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 DCPSQ96C86 337 aaKnown RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 ZNF668Q96K58 619 aaPredicted RBP12.38□□□□□ -0.43
CLK4-206ENST00000520878 AGPAT3Q9NRZ7 376 aa12.38□□□□□ -0.43
CLK4-206ENST00000520878 TBC1D12O60347 775 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 TCP1P17987 556 aaKnown RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 IFI16Q16666 785 aaKnown RBP12.37□□□□□ -0.43
CLK4-206ENST00000520878 CFAP221Q4G0U5 840 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 ZCWPW2Q504Y3 356 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 KLHDC7AQ5VTJ3 777 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 SCYL3Q8IZE3 742 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
CLK4-206ENST00000520878 NSUN6Q8TEA1 469 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms