RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 SESN3P58005 492 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 ROM1Q03395 351 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 DDB1Q16531 1140 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 VWA3BQ502W6 1294 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 TTC38Q5R3I4 469 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 PRR31Q5SQ13 230 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 PRAMEF18Q5VWM3 479 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 TIGD7Q6NT04 549 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 RTN4RL1Q86UN2 441 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 STK32CQ86UX6 486 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 DDX42Q86XP3 938 aaKnown RBP eCLIP4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 WDR66Q8TBY9 1149 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 SLC5A5Q92911 643 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 FOXRED1Q96CU9 486 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 SYT3Q9BQG1 590 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 KRTAP3-1Q9BYR8 98 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZMAT4Q9H898 229 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 SPATA6Q9NWH7 488 aaPredicted RBP4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 UCKL1Q9NWZ5 548 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZFP69BQ9UJL9 534 aa4.57□□□□□ -1.68
HMGB1P41-201ENST00000520234 UBA6A0AVT1 1052 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 MAFGO15525 162 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 GPR39O43194 453 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 MAFO75444 373 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 MC4RP32245 332 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 IL13P35225 146 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 SARSP49591 514 aaKnown RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 ALDH6A1Q02252 535 aaKnown RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 DLX2Q07687 328 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 STILQ15468 1287 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 TERF2Q15554 542 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 BROXQ5VW32 411 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 ESRP1Q6NXG1 681 aaKnown RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 FRMD7Q6ZUT3 714 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 RASSF3Q86WH2 238 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 SPATS2Q86XZ4 545 aaKnown RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 PHYKPLQ8IUZ5 450 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 C7orf31Q8N865 590 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 TP53I13Q8NBR0 393 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 ERCC4Q92889 916 aaPredicted RBP4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 MAML3Q96JK9 1138 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZSWIM3Q96MP5 696 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 AMNQ9BXJ7 453 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 OR10A5Q9H207 317 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 KCND1Q9NSA2 647 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 FBXO10Q9UK96 956 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 CROTQ9UKG9 612 aa4.56□□□□□ -1.68
HMGB1P41-201ENST00000520234 ALG1L2C9J202 215 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 H0Y858 1186 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 FFAR3O14843 346 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 RAB11FIP3O75154 756 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 KNG1P01042 644 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 PRLP01236 227 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZNF28P17035 718 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 CDK11BP21127 795 aaKnown RBP4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 APEX1P27695 318 aaKnown RBP4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 ID4P47928 161 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 GLRBP48167 497 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 RGL3Q3MIN7 710 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 TRMT10BQ6PF06 316 aaKnown RBP4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 USP51Q70EK9 711 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 NECAB2Q7Z6G3 386 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 CARFQ8N187 725 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 Q8N1X5 172 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 STPG3Q8N7X2 389 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZNF526Q8TF50 670 aaPredicted RBP4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 TUBGCP5Q96RT8 1024 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 L2HGDHQ9H9P8 463 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 KCNG1Q9UIX4 513 aa4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 NOC2LQ9Y3T9 749 aaKnown RBP4.55□□□□□ -1.68
HMGB1P41-201ENST00000520234 PHLDB1Q86UU1 1377 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 hCG_2014768A0A024R1R8 64 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 C9orf118A6NHY6 69 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 CUTAO60888 179 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 IL18BPO95998 194 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 COL6A1P12109 1028 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZNF20P17024 532 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 MLLT6P55198 1093 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 BCAR1P56945 870 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 ANAPC15P60006 121 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 IGBP1P78318 339 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 SLC6A3Q01959 620 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 NFATC3Q12968 1075 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 HNRNPA0Q13151 305 aaKnown RBP4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 FAM26FQ5R3K3 315 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 IQSEC1Q6DN90 963 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 SLFN12LQ6IEE8 588 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 ESPNLQ6ZVH7 1005 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 TTC9BQ8N6N2 239 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 GPATCH3Q96I76 525 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 TACO1Q9BSH4 297 aaKnown RBP4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 FAM126AQ9BYI3 521 aaPredicted RBP4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 ZDHHC5Q9C0B5 715 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 PUS7LQ9H0K6 701 aaKnown RBP4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 WNT8AQ9H1J5 351 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 SLC5A4Q9NY91 659 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 FTSJ1Q9UET6 329 aa4.54□□□□□ -1.68
HMGB1P41-201ENST00000520234 DDX3XO00571 662 aaKnown RBP eCLIP4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 FZD7O75084 574 aa4.53□□□□□ -1.68
HMGB1P41-201ENST00000520234 ITGB3P05106 788 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms