RNA–Protein interactions for RNA: ENST00000519587.1

SDC2-203, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 557 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-203ENST00000519587 TUBE1Q9UJT0 475 aa15.72■□□□□ 0.11
SDC2-203ENST00000519587 MROH7Q68CQ1 1323 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 TMEM150BA6NC51 233 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 TBCAO75347 108 aaKnown RBP15.71■□□□□ 0.11
SDC2-203ENST00000519587 RPLP2P05387 115 aaKnown RBP15.71■□□□□ 0.11
SDC2-203ENST00000519587 DNM2P50570 870 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 IGBP1P78318 339 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 EMC2Q15006 297 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 TARBP2Q15633 366 aaKnown RBP15.71■□□□□ 0.11
SDC2-203ENST00000519587 LONRF3Q496Y0 759 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 CHRDL2Q6WN34 429 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 NUP62CLQ9H1M0 184 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 GTF2IRD1Q9UHL9 959 aa15.71■□□□□ 0.11
SDC2-203ENST00000519587 ZBTB39O15060 712 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 CYP11B2P19099 503 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 GUCY2CP25092 1073 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 TMOD1P28289 359 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 AFMP43652 599 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 KLHL40Q2TBA0 621 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 NECAB2Q7Z6G3 386 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 ELOA2Q8IYF1 753 aaPredicted RBP15.7■□□□□ 0.1
SDC2-203ENST00000519587 GPT2Q8TD30 523 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 LRRC15Q8TF66 581 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 TCP11Q8WWU5 503 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 CCDC47Q96A33 483 aaKnown RBP15.7■□□□□ 0.1
SDC2-203ENST00000519587 DRC1Q96MC2 740 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 MTRQ99707 1265 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 CLSTN2Q9H4D0 955 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 C11orf49Q9H6J7 331 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 DHX33Q9H6R0 707 aaKnown RBP15.7■□□□□ 0.1
SDC2-203ENST00000519587 SETD4Q9NVD3 440 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 HDAC6Q9UBN7 1215 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 ODF2LQ9ULJ1 636 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 NOD1Q9Y239 953 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 EVPLQ92817 2033 aa15.7■□□□□ 0.1
SDC2-203ENST00000519587 TRIP12Q14669 1992 aaPredicted RBP15.69■□□□□ 0.1
SDC2-203ENST00000519587 A0A087WWV3 80 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 ZBTB42B2RXF5 422 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 GTPBP6O43824 516 aaPredicted RBP15.69■□□□□ 0.1
SDC2-203ENST00000519587 MAFO75444 373 aaPredicted RBP15.69■□□□□ 0.1
SDC2-203ENST00000519587 SMC2O95347 1197 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 C22orf31O95567 290 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 HOXC8P31273 242 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 POSTNQ15063 836 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 RINT1Q6NUQ1 792 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 TAF2Q6P1X5 1199 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 METTL13Q8N6R0 699 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 TRAPPC12Q8WVT3 735 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 KIFAP3Q92845 792 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 PAGE5Q96GU1 130 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 MAP7D2Q96T17 732 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 SH2D3AQ9BRG2 576 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 RUSC1Q9BVN2 902 aa15.69■□□□□ 0.1
SDC2-203ENST00000519587 SENP6Q9GZR1 1112 aaPredicted RBP15.69■□□□□ 0.1
SDC2-203ENST00000519587 MBLAC1A4D2B0 266 aaPredicted RBP15.68■□□□□ 0.1
SDC2-203ENST00000519587 MYMKA6NI61 221 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 ARVCFO00192 962 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 TLR3O15455 904 aaKnown RBP15.68■□□□□ 0.1
SDC2-203ENST00000519587 FAM13AO94988 1023 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 COL6A1P12109 1028 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 KLRC1P26715 233 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 ASIC1P78348 528 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 CNNM4Q6P4Q7 775 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 MTHFD1LQ6UB35 978 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 C1orf186Q6ZWK4 172 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 RSPH3Q86UC2 560 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 SLC43A3Q8NBI5 491 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 DDX12PQ92771 950 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 C7orf25Q9BPX7 421 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 TRIM9Q9C026 710 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 CUL9Q8IWT3 2517 aa15.68■□□□□ 0.1
SDC2-203ENST00000519587 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.67■□□□□ 0.1
SDC2-203ENST00000519587 HIP1RO75146 1068 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 CYP2C9P11712 490 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 GAP43P17677 238 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 MNX1P50219 401 aaPredicted RBP15.67■□□□□ 0.1
SDC2-203ENST00000519587 PPP2R5AQ15172 486 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 PTGISQ16647 500 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 CCDC183Q5T5S1 534 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 FAM102BQ5T8I3 360 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 C1orf53Q5VUE5 145 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 IER5Q5VY09 327 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 SH3RF1Q7Z6J0 888 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 CCDC65Q8IXS2 484 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 ZNF710Q8N1W2 664 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 CCDC155Q8N6L0 562 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 DIS3LQ8TF46 1054 aaKnown RBP15.67■□□□□ 0.1
SDC2-203ENST00000519587 PSPC1Q8WXF1 523 aaKnown RBP15.67■□□□□ 0.1
SDC2-203ENST00000519587 STAMQ92783 540 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 PAWRQ96IZ0 340 aaKnown RBP15.67■□□□□ 0.1
SDC2-203ENST00000519587 CEP89Q96ST8 783 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 REEP2Q9BRK0 252 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 SUGCTQ9HAC7 445 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 KCNG1Q9UIX4 513 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 PCDHA2Q9Y5H9 948 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 COL4A3BPQ9Y5P4 624 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 GRIN2DO15399 1336 aa15.67■□□□□ 0.1
SDC2-203ENST00000519587 IGKV6-21A0A0C4DH24 114 aa15.66■□□□□ 0.1
SDC2-203ENST00000519587 SMIM35A0A1B0GVV1 85 aa15.66■□□□□ 0.1
SDC2-203ENST00000519587 IDEP14735 1019 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms