RNA–Protein interactions for RNA: ENST00000519113.5

CTNNA1-213, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 859 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-213ENST00000519113 ABHD15Q6UXT9 468 aa21.58■■□□□ 1.05
CTNNA1-213ENST00000519113 TMEM117Q9H0C3 514 aa21.58■■□□□ 1.05
CTNNA1-213ENST00000519113 RIC8AQ9NPQ8 531 aa21.58■■□□□ 1.05
CTNNA1-213ENST00000519113 HCSTQ9UBK5 93 aa21.58■■□□□ 1.05
CTNNA1-213ENST00000519113 FGFR1P11362 822 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 PPM1AP35813 382 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 KRT17Q04695 432 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 LLGL2Q6P1M3 1020 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 PDXDC2PQ6P474 469 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 APOL5Q9BWW9 433 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 ZNF302Q9NR11 478 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 PLXNA4Q9HCM2 1894 aa21.57■■□□□ 1.04
CTNNA1-213ENST00000519113 CCNE2O96020 404 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 ZNF76P36508 570 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 NAPAP54920 295 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 KIZQ2M2Z5 673 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 TPRNQ4KMQ1 711 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 WWC2Q6AWC2 1192 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 PPP1R18Q6NYC8 613 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 MIS18BP1Q6P0N0 1132 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 SYNE3Q6ZMZ3 975 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 NIPA1Q7RTP0 329 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 FAM228AQ86W67 206 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 RAB11FIP4Q86YS3 637 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 UBALD2Q8IYN6 164 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 KREMEN2Q8NCW0 462 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 CASP10Q92851 521 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 OSMRQ99650 979 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 ANO3Q9BYT9 981 aa21.56■■□□□ 1.04
CTNNA1-213ENST00000519113 HIDE1A8MVS5 230 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 H0Y858 1186 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 DDX39AO00148 427 aaKnown RBP21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 ADCY7P51828 1080 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 CES5AQ6NT32 575 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 KCNT2Q6UVM3 1135 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 TMC7Q7Z402 723 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 ABI1Q8IZP0 508 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 PGBD1Q96JS3 809 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 ZNF558Q96NG5 402 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 NECTIN4Q96NY8 510 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 GLT8D2Q9H1C3 349 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 KMT2EQ8IZD2 1858 aa21.55■■□□□ 1.04
CTNNA1-213ENST00000519113 ZBTB42B2RXF5 422 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 GALR2O43603 387 aaPredicted RBP21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 SP100P23497 879 aaPredicted RBP21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 SREBF1P36956 1147 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 ITIH3Q06033 890 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 AP3B2Q13367 1082 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 MTMR3Q13615 1198 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 DSC3Q14574 896 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 BMP2KLQ5H9B9 411 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 SWSAP1Q6NVH7 229 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 MICU3Q86XE3 530 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 CCDC60Q8IWA6 550 aaPredicted RBP21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 CKAP2LQ8IYA6 745 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 LRRC43Q8N309 656 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 METTL13Q8N6R0 699 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 CASD1Q96PB1 797 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 PPP1R16BQ96T49 567 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 SPG21Q9NZD8 308 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 SORCS3Q9UPU3 1222 aa21.54■■□□□ 1.04
CTNNA1-213ENST00000519113 LOXHD1Q8IVV2 1947 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 PROB1E7EW31 1015 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 GPR32O75388 356 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 C22orf31O95567 290 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 PDGFBP01127 241 aaPredicted RBP21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 ZSCAN20P17040 1043 aaPredicted RBP21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 FOXK2Q01167 660 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 LRRC55Q6ZSA7 311 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 SGMS1Q86VZ5 419 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 ZNF710Q8N1W2 664 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 BBXQ8WY36 941 aaPredicted RBP21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 ADAM7Q9H2U9 754 aa21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 RBM28Q9NW13 759 aaKnown RBP21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 FNDC1Q4ZHG4 1894 aaPredicted RBP21.53■■□□□ 1.04
CTNNA1-213ENST00000519113 SMCO2A6NFE2 343 aa21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 VTNP04004 478 aa21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 SMC1AQ14683 1233 aaKnown RBP21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 BMS1Q14692 1282 aaKnown RBP21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 TYW1BQ6NUM6 668 aa21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 PLA2G4DQ86XP0 818 aa21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 MRPL43Q8N983 215 aaKnown RBP21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 CEP131Q9UPN4 1083 aa21.52■■□□□ 1.04
CTNNA1-213ENST00000519113 MYO15AQ9UKN7 3530 aa21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 IPO5O00410 1097 aaKnown RBP21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 SLC27A2O14975 620 aa21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 MAGEB2O15479 319 aa21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 DHX15O43143 795 aaKnown RBP21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 ATP4AP20648 1035 aa21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 LRRC2Q9BYS8 371 aa21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 MAFBQ9Y5Q3 323 aaPredicted RBP21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 CNTNAP5Q8WYK1 1306 aa21.51■■□□□ 1.03
CTNNA1-213ENST00000519113 PTPRZ1P23471 2315 aaPredicted RBP21.5■■□□□ 1.03
CTNNA1-213ENST00000519113 C2CD4DB7Z1M9 353 aa21.5■■□□□ 1.03
CTNNA1-213ENST00000519113 TMOD1P28289 359 aa21.5■■□□□ 1.03
CTNNA1-213ENST00000519113 MTHFRP42898 656 aa21.5■■□□□ 1.03
CTNNA1-213ENST00000519113 ECHDC2Q86YB7 292 aa21.5■■□□□ 1.03
CTNNA1-213ENST00000519113 MAP7D2Q96T17 732 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms