RNA–Protein interactions for RNA: ENST00000517256.1

SNORA40.17-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 115 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.17-201ENST00000517256 NKD1Q969G9 470 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 ANKRD9Q96BM1 317 aaPredicted RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 POM121Q96HA1 1249 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 RPL10LQ96L21 214 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SETDB2Q96T68 719 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 TCF25Q9BQ70 676 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SH2D3AQ9BRG2 576 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 ZPBPQ9BS86 351 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 HERPUD2Q9BSE4 406 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SLC46A2Q9BY10 475 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 METTL14Q9HCE5 456 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 AKIP1Q9NQ31 210 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 CASS4Q9NQ75 786 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 KCND1Q9NSA2 647 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 TRMT13Q9NUP7 481 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 SYBUQ9NX95 663 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 TUBA8Q9NY65 449 aaPredicted RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 FLRT1Q9NZU1 646 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 MYOTQ9UBF9 498 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 WWC3Q9ULE0 1092 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 BTBD3Q9Y2F9 522 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 CCDC9Q9Y3X0 531 aaKnown RBP0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 WNT6Q9Y6F9 365 aa0.59□□□□□ -2.31
SNORA40.17-201ENST00000517256 IGKV6D-21A0A0A0MT36 114 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TCRBV5S2A0A599 114 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 KLRG2A4D1S0 409 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 C2orf71A6NGG8 1288 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CD8B2A6NJW9 211 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TRIM24O15164 1050 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 C1QL1O75973 258 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF432O94892 652 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPATA31D3P0C874 917 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CYP2D6P10635 497 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ITGA4P13612 1032 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TCEA1P23193 301 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 DDX6P26196 483 aaKnown RBP eCLIP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CDC25AP30304 524 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 KCNJ5P48544 419 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 LIG3P49916 1009 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 RPS26P62854 115 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 RPL11P62913 178 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 FKBP4Q02790 459 aaKnown RBP eCLIP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF211Q13398 564 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TP53BP2Q13625 1128 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 UBE3CQ15386 1083 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZIK1Q3SY52 487 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 FAM153CQ494X1 144 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 UBAP2Q5T6F2 1119 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CAPRIN2Q6IMN6 1127 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 RCSD1Q6JBY9 416 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 SLC18B1Q6NT16 456 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPATA31D4Q6ZUB0 917 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 NLRC3Q7RTR2 1065 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CXorf67Q86X51 503 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TRIM48Q8IWZ4 208 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 C7orf61Q8IZ16 206 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPAG16Q8N0X2 631 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CTCFLQ8NI51 663 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 PLEKHO2Q8TD55 490 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 CFHR4Q92496 578 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 DPF1Q92782 380 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 GCDHQ92947 438 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 RNF34Q969K3 372 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TMEM169Q96HH4 297 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 UROC1Q96N76 676 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 SLC6A18Q96N87 628 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 TRNAU1APQ9NX07 287 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 PRR13Q9NZ81 148 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ARHGAP28Q9P2N2 729 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ARPP21Q9UBL0 812 aaPredicted RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 MCM8Q9UJA3 840 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 HDAC5Q9UQL6 1122 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF652Q9Y2D9 606 aa0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 MTO1Q9Y2Z2 717 aaKnown RBP0.58□□□□□ -2.32
SNORA40.17-201ENST00000517256 UBE2QL1A1L167 161 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 KRIT1O00522 736 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 MGST3O14880 152 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 DGKIO75912 1065 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 CRYABP02511 175 aaKnown RBP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 FDXRP22570 491 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 CERS1P27544 350 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 HOXC13P31276 330 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 MPLP40238 635 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 NANOS2P60321 138 aaKnown RBP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 ATP2C1P98194 919 aaPredicted RBP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 PLCB2Q00722 1185 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 TCEAL1Q15170 157 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 MRGPRG-AS1Q2M3A8 158 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 SPDYE7PQ495Y7 208 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 ZNF618Q5T7W0 954 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 TMEM164Q5U3C3 297 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 TDRD10Q5VZ19 366 aaKnown RBP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 DCAF15Q66K64 600 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 FCRLBQ6BAA4 426 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 SUMO4Q6EEV6 95 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 LARP4Q71RC2 724 aaKnown RBP eCLIP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 GDF7Q7Z4P5 450 aa0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 ADAT2Q7Z6V5 191 aaKnown RBP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 MRPL10Q7Z7H8 261 aaKnown RBP0.57□□□□□ -2.32
SNORA40.17-201ENST00000517256 NEK8Q86SG6 692 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms