RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 RPAP3Q9H6T3 665 aaPredicted RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 GREM2Q9H772 168 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 SFXN1Q9H9B4 322 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 NGRNQ9NPE2 291 aaKnown RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 FSCN3Q9NQT6 498 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 GPHNQ9NQX3 736 aaPredicted RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 LATS2Q9NRM7 1088 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 TOR4AQ9NXH8 423 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 DDX41Q9UJV9 622 aaKnown RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 ADAMTS5Q9UNA0 930 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 PCDHB12Q9Y5F1 795 aa4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 PRRC2CQ9Y520 2896 aaKnown RBP4.02□□□□□ -1.77
SCARNA13-201ENST00000516672 ZNF316A6NFI3 1004 aaPredicted RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 SPDYE4A6NLX3 237 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 KLK10O43240 276 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 F12P00748 615 aaPredicted RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 ASNSP08243 561 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 EIF4A1P60842 406 aaKnown RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 RTP5Q14D33 572 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 SHROOM1Q2M3G4 852 aaPredicted RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 TRIM71Q2Q1W2 868 aaKnown RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 TBC1D25Q3MII6 688 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 TMEM198Q66K66 360 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 PARM1Q6UWI2 310 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 ARMCX2Q7L311 632 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 THNSL1Q8IYQ7 743 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 MAGEB6Q8N7X4 407 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 OR2I1PQ8NGU4 316 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 ZNF564Q8TBZ8 553 aaPredicted RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 NUDT8Q8WV74 236 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 PIGKQ92643 395 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 EXTL1Q92935 676 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 WNT8BQ93098 351 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 ZNF594Q96JF6 807 aaPredicted RBP4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 PRIMPOLQ96LW4 560 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 IDI2Q9BXS1 227 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 SLC25A18Q9H1K4 315 aa4.01□□□□□ -1.77
SCARNA13-201ENST00000516672 CLUHO75153 1309 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 C2orf16Q68DN1 1984 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 CCDC163A0A0D9SF12 145 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 SLC25A27O95847 323 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 PRKCGP05129 697 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 ATXN1LP0C7T5 689 aaKnown RBP4□□□□□ -1.77
SCARNA13-201ENST00000516672 CHRNB1P11230 501 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 RPL17P18621 184 aaKnown RBP4□□□□□ -1.77
SCARNA13-201ENST00000516672 GNLYP22749 145 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 CA8P35219 290 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 GYG1P46976 350 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 CTSWP56202 376 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 PICALMQ13492 652 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 COG2Q14746 738 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 TAF7Q15545 349 aaPredicted RBP4□□□□□ -1.77
SCARNA13-201ENST00000516672 MCM10Q7L590 875 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 ZNF467Q7Z7K2 595 aaPredicted RBP4□□□□□ -1.77
SCARNA13-201ENST00000516672 MINDY1Q8N5J2 469 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 TTLL11Q8NHH1 800 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 TBC1D22AQ8WUA7 517 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 OSBPL7Q9BZF2 842 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 TMEM245Q9H330 911 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 WDR6Q9NNW5 1121 aaKnown RBP4□□□□□ -1.77
SCARNA13-201ENST00000516672 DDX4Q9NQI0 724 aaKnown RBP4□□□□□ -1.77
SCARNA13-201ENST00000516672 HOXC10Q9NYD6 342 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 ENTPD4Q9Y227 616 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 Q9Y3F1 56 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 PARP14Q460N5 1801 aa4□□□□□ -1.77
SCARNA13-201ENST00000516672 VWFP04275 2813 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MYH13Q9UKX3 1938 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 NUP205Q92621 2012 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 C2orf71A6NGG8 1288 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 RSPH10B2B2RC85 870 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MAN2B1O00754 1011 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 N4BP3O15049 544 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MTSS1O43312 755 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 RAD21O60216 631 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 CBFA2T3O75081 653 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 ALX3O95076 343 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 C4BPAP04003 597 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PCCAP05165 728 aaPredicted RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 RSPH10BP0C881 870 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 HIBADHP31937 336 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 GBP1P32455 592 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 POLGP54098 1239 aaPredicted RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 INHBCP55103 352 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PCBP4P57723 403 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 NFX1Q12986 1120 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PTGDRQ13258 359 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 DIXDC1Q155Q3 683 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 SPOUT1Q5T280 376 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 BEND3Q5T5X7 828 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 HGSNATQ68CP4 663 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 PMS2CLQ68D20 193 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 CAPRIN2Q6IMN6 1127 aaKnown RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 C15orf39Q6ZRI6 1047 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 Q6ZS52 159 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 GET4Q7L5D6 327 aaPredicted RBP3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 TMC7Q7Z402 723 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 CCDC144CPQ8IYA2 1237 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MIER1Q8N108 512 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MB21D1Q8N884 522 aa3.99□□□□□ -1.77
SCARNA13-201ENST00000516672 MRPL43Q8N983 215 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms