RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GUCY1B3Q02153 619 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 RAD51AP2Q09MP3 1159 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 GRM1Q13255 1194 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 ACAP1Q15027 740 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 PIK3R6Q5UE93 754 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 NAIF1Q69YI7 327 aaPredicted RBP0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 SUSD1Q6UWL2 747 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 AGMOQ6ZNB7 445 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 C9orf47Q6ZRZ4 202 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 SV2BQ7L1I2 683 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 NRACQ8N912 160 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 LCE3DQ9BYE3 92 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 KCNH6Q9H252 994 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 AKIP1Q9NQ31 210 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 AFG3L2Q9Y4W6 797 aa0.45□□□□□ -2.34
RNU6-539P-201ENST00000516665 AOX1Q06278 1338 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 NPHP3-ACAD11A0A0J9YXS1 232 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 AURKAO14965 403 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 ITGAMP11215 1152 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 TFE3P19532 575 aaPredicted RBP0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 SFPQP23246 707 aaKnown RBP eCLIP0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 ADCY8P40145 1251 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 RGS3P49796 1198 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 PLCD1P51178 756 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 BLOC1S1P78537 153 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 PFKPQ01813 784 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 BEAN1Q3B7T3 259 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 MROH9Q5TGP6 573 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 RIOX2Q8IUF8 465 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 SARAFQ96BY9 339 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 PDLIM2Q96JY6 352 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 ZDHHC15Q96MV8 337 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 UROC1Q96N76 676 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 EGLN1Q9GZT9 426 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 OTOGLQ3ZCN5 2332 aa0.44□□□□□ -2.34
RNU6-539P-201ENST00000516665 HGSO14964 777 aaPredicted RBP0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 OAZ2O95190 189 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 T-ENOLP0DO92 83 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 MPGP29372 298 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 MMP13P45452 471 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 SLC10A2Q12908 348 aaPredicted RBP0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 ZIK1Q3SY52 487 aaPredicted RBP0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 FCRLBQ6BAA4 426 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 FAM111BQ6SJ93 734 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 MYPOPQ86VE0 399 aaPredicted RBP0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 C7orf61Q8IZ16 206 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 SPAG16Q8N0X2 631 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 CPEB3Q8NE35 698 aaKnown RBP0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 MDGA1Q8NFP4 955 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 ADAM2Q99965 735 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 HERPUD2Q9BSE4 406 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 OSBPL7Q9BZF2 842 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 CPNE5Q9HCH3 593 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 EIF2B4Q9UI10 523 aaKnown RBP0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 PRO0461Q9UI25 63 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 CDC42EP3Q9UKI2 254 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 BRPF3Q9ULD4 1205 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 FAM184BQ9ULE4 1060 aa0.43□□□□□ -2.34
RNU6-539P-201ENST00000516665 CD8B2A6NJW9 211 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 LINC01548A6NM66 108 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 C9IYK1 514 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 SPDEFO95238 335 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 CD1AP06126 327 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 PAMP19021 973 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 HK1P19367 917 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 IRF9Q00978 393 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 FKBP4Q02790 459 aaKnown RBP eCLIP0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 GRIN1Q05586 938 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 NPY5RQ15761 445 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 STEAP3Q658P3 488 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 TRIM68Q6AZZ1 485 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 ZNF66Q6ZN08 573 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 NLRP10Q86W26 655 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 RABGGTAQ92696 567 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 SLC6A18Q96N87 628 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 SH2D3AQ9BRG2 576 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 QTRT1Q9BXR0 403 aaKnown RBP0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 ANO2Q9NQ90 1003 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 TRMT13Q9NUP7 481 aaKnown RBP0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 TUBA8Q9NY65 449 aaPredicted RBP0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 TRPM5Q9NZQ8 1165 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 MYOTQ9UBF9 498 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 FBN3Q75N90 2809 aa0.42□□□□□ -2.34
RNU6-539P-201ENST00000516665 ZNF318Q5VUA4 2279 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 FAM221AA4D161 298 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 ZNF839A8K0R7 811 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 RNASET2O00584 256 aaKnown RBP0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 SOCS2O14508 198 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 LATS1O95835 1130 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 LDLRP01130 860 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 GPD1P21695 349 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 SEPHS1P49903 392 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 LIG3P49916 1009 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 MEOX1P50221 254 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 TFF2Q03403 129 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 SF3B2Q13435 895 aaKnown RBP0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 MAP3K11Q16584 847 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 MST1LQ2TV78 715 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 WDR72Q3MJ13 1102 aa0.41□□□□□ -2.34
RNU6-539P-201ENST00000516665 NOL9Q5SY16 702 aaKnown RBP0.41□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms