RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 NEU4Q8WWR8 484 aaPredicted RBP5.99□□□□□ -1.45
LINC01088-211ENST00000515597 IKZF4Q9H2S9 585 aa5.99□□□□□ -1.45
LINC01088-211ENST00000515597 AGO3Q9H9G7 860 aaKnown RBP5.99□□□□□ -1.45
LINC01088-211ENST00000515597 KCNH7Q9NS40 1196 aa5.99□□□□□ -1.45
LINC01088-211ENST00000515597 HECAQ9UBI9 543 aaPredicted RBP5.99□□□□□ -1.45
LINC01088-211ENST00000515597 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.98□□□□□ -1.45
LINC01088-211ENST00000515597 SLC26A4O43511 780 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 KCNQ2O43526 872 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 GRM7Q14831 915 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 SGMS1Q86VZ5 419 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 SHCBP1Q8NEM2 672 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 SLC7A14Q8TBB6 771 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 DNAJC2Q99543 621 aaKnown RBP5.98□□□□□ -1.45
LINC01088-211ENST00000515597 MRPL4Q9BYD3 311 aaKnown RBP5.98□□□□□ -1.45
LINC01088-211ENST00000515597 NELFAQ9H3P2 528 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 C11orf21Q9P2W6 132 aa5.98□□□□□ -1.45
LINC01088-211ENST00000515597 WDR33Q9C0J8 1336 aaKnown RBP5.98□□□□□ -1.45
LINC01088-211ENST00000515597 CAPN14A8MX76 684 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 STAT3P40763 770 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 TUBA3CQ13748 450 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 TMEM132BQ14DG7 1078 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 FNDC7Q5VTL7 733 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 TUBA3EQ6PEY2 450 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 LILRB2Q8N423 598 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 ERCC4Q92889 916 aaPredicted RBP5.97□□□□□ -1.45
LINC01088-211ENST00000515597 MMRN2Q9H8L6 949 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 CDK11AQ9UQ88 783 aaPredicted RBP5.97□□□□□ -1.45
LINC01088-211ENST00000515597 B3GALT1Q9Y5Z6 326 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 PTCH2Q9Y6C5 1203 aa5.97□□□□□ -1.45
LINC01088-211ENST00000515597 HHEXQ03014 270 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 ADAM15Q13444 863 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 RIN1Q13671 783 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 SAFB2Q14151 953 aaKnown RBP eCLIP5.96□□□□□ -1.466e-7■■■□□ 15.9
LINC01088-211ENST00000515597 ACAP1Q15027 740 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 NFE2L2Q16236 605 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 CATSPEREQ5SY80 951 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 OVCH1Q7RTY7 1134 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 BCL6BQ8N143 479 aaPredicted RBP5.96□□□□□ -1.46
LINC01088-211ENST00000515597 AMER2Q8N7J2 671 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 DLG3Q92796 817 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 SCLYQ96I15 445 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 CELF4Q9BZC1 486 aaKnown RBP5.96□□□□□ -1.46
LINC01088-211ENST00000515597 MSL2Q9HCI7 577 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 SFMBT1Q9UHJ3 866 aa5.96□□□□□ -1.46
LINC01088-211ENST00000515597 ADH4P08319 380 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 DPTQ07507 201 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 SPTY2D1Q68D10 685 aaPredicted RBP5.95□□□□□ -1.46
LINC01088-211ENST00000515597 ZNF483Q8TF39 744 aaPredicted RBP5.95□□□□□ -1.46
LINC01088-211ENST00000515597 MAGEB10Q96LZ2 347 aaPredicted RBP5.95□□□□□ -1.46
LINC01088-211ENST00000515597 CEP89Q96ST8 783 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 NCOA5Q9HCD5 579 aaKnown RBP5.95□□□□□ -1.46
LINC01088-211ENST00000515597 CEP72Q9P209 647 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 MAGEL2Q9UJ55 1249 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 GIT1Q9Y2X7 761 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 ASB1Q9Y576 335 aa5.95□□□□□ -1.46
LINC01088-211ENST00000515597 SLC12A8A0AV02 714 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 GOLGA6L22H0YM25 854 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 APPP05067 770 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 APEX1P27695 318 aaKnown RBP5.94□□□□□ -1.46
LINC01088-211ENST00000515597 SDHAP31040 664 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 INHBEP58166 350 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 CRHR2Q13324 411 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 SMN1Q16637 294 aaKnown RBP5.94□□□□□ -1.46
LINC01088-211ENST00000515597 ABHD17CQ6PCB6 329 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 BRAPQ7Z569 592 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 ADGRE4PQ86SQ3 457 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 CALML6Q8TD86 181 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 LARP4BQ92615 738 aaKnown RBP5.94□□□□□ -1.46
LINC01088-211ENST00000515597 TRIM39Q9HCM9 518 aa5.94□□□□□ -1.46
LINC01088-211ENST00000515597 REXO2Q9Y3B8 237 aaKnown RBP5.94□□□□□ -1.46
LINC01088-211ENST00000515597 A0A087X1B8 175 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 A0A1W2PRX2 142 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 TCRBV16S1A1N1A0A5B0 115 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 PLD2O14939 933 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 HIP1RO75146 1068 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 NPTXRO95502 500 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 KCNA6P17658 529 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 ATP2C1P98194 919 aaPredicted RBP5.93□□□□□ -1.46
LINC01088-211ENST00000515597 IRF9Q00978 393 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 TMEM177Q53S58 311 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 FGD2Q7Z6J4 655 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 RTN4RL1Q86UN2 441 aaPredicted RBP5.93□□□□□ -1.46
LINC01088-211ENST00000515597 LDLRAD3Q86YD5 345 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 TMPRSS6Q8IU80 811 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 IGSF22Q8N9C0 903 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 CLIP3Q96DZ5 547 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 SH3BP1Q9Y3L3 701 aa5.93□□□□□ -1.46
LINC01088-211ENST00000515597 CTDP1Q9Y5B0 961 aaPredicted RBP5.93□□□□□ -1.46
LINC01088-211ENST00000515597 KRT37O76014 449 aa5.92□□□□□ -1.46
LINC01088-211ENST00000515597 INHBCP55103 352 aa5.92□□□□□ -1.46
LINC01088-211ENST00000515597 ALDH6A1Q02252 535 aaKnown RBP5.92□□□□□ -1.46
LINC01088-211ENST00000515597 MAP3K12Q12852 859 aa5.92□□□□□ -1.46
LINC01088-211ENST00000515597 RRP1BQ14684 758 aaKnown RBP5.92□□□□□ -1.46
LINC01088-211ENST00000515597 BMS1Q14692 1282 aaKnown RBP5.92□□□□□ -1.46
LINC01088-211ENST00000515597 ZNF627Q7L945 461 aa5.92□□□□□ -1.46
LINC01088-211ENST00000515597 UBXN4Q92575 508 aa5.92□□□□□ -1.46
LINC01088-211ENST00000515597 FOXRED1Q96CU9 486 aaPredicted RBP5.92□□□□□ -1.46
LINC01088-211ENST00000515597 DRC1Q96MC2 740 aa5.92□□□□□ -1.46
LINC01088-211ENST00000515597 ZNF703Q9H7S9 590 aaPredicted RBP5.92□□□□□ -1.46
LINC01088-211ENST00000515597 SLC2A4RGQ9NR83 387 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms