RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 ATP1A3P13637 1013 aa21.82■■□□□ 1.08
SSBP2-218ENST00000514493 HOXD10P28358 340 aa21.82■■□□□ 1.08
SSBP2-218ENST00000514493 HS1BP3Q53T59 392 aa21.82■■□□□ 1.08
SSBP2-218ENST00000514493 GUF1Q8N442 669 aaKnown RBP21.82■■□□□ 1.08
SSBP2-218ENST00000514493 ERO1AQ96HE7 468 aa21.82■■□□□ 1.08
SSBP2-218ENST00000514493 DHTKD1Q96HY7 919 aaPredicted RBP21.82■■□□□ 1.08
SSBP2-218ENST00000514493 DGAT1O75907 488 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 GNRH1P01148 92 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 PTMAP06454 111 aaKnown RBP21.81■■□□□ 1.08
SSBP2-218ENST00000514493 MMP3P08254 477 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 FANCCQ00597 558 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 MTERF2Q49AM1 385 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 TLK2Q86UE8 772 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 GLIS3Q8NEA6 775 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 ATP8B4Q8TF62 1192 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 BBXQ8WY36 941 aaPredicted RBP21.81■■□□□ 1.08
SSBP2-218ENST00000514493 FGFBP2Q9BYJ0 223 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 NRBP2Q9NSY0 501 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 TBC1D7Q9P0N9 293 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 FAM184BQ9ULE4 1060 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 PPME1Q9Y570 386 aa21.81■■□□□ 1.08
SSBP2-218ENST00000514493 FKTNO75072 461 aa21.8■■□□□ 1.08
SSBP2-218ENST00000514493 DRC1Q96MC2 740 aa21.8■■□□□ 1.08
SSBP2-218ENST00000514493 ATP6V0A4Q9HBG4 840 aa21.8■■□□□ 1.08
SSBP2-218ENST00000514493 AKR1A1P14550 325 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 MARK3P27448 753 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 PLCB4Q15147 1175 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 TARBP2Q15633 366 aaKnown RBP21.79■■□□□ 1.08
SSBP2-218ENST00000514493 MYOCDQ8IZQ8 938 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 MYCT1Q8N699 235 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 MCPH1Q8NEM0 835 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 TRPV1Q8NER1 839 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 CEP89Q96ST8 783 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 POLD4Q9HCU8 107 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 PDLIM7Q9NR12 457 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 SAMSN1Q9NSI8 373 aaKnown RBP21.79■■□□□ 1.08
SSBP2-218ENST00000514493 ERAP1Q9NZ08 941 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 IFNKQ9P0W0 207 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 EVPLQ92817 2033 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 PPFIA4O75335 1185 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 CCNE1P24864 410 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 TPD52L1Q16890 204 aaPredicted RBP21.79■■□□□ 1.08
SSBP2-218ENST00000514493 CDKAL1Q5VV42 579 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 MAEAQ7L5Y9 396 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 P2RX5Q93086 422 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 LENG1Q96BZ8 264 aaPredicted RBP21.79■■□□□ 1.08
SSBP2-218ENST00000514493 XPNPEP1Q9NQW7 623 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 Q9Y3F1 56 aa21.79■■□□□ 1.08
SSBP2-218ENST00000514493 SFI1A8K8P3 1242 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 GOLGA6L6A8MZA4 724 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 SERPINC1P01008 464 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 EMC2Q15006 297 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 LRRC41Q15345 812 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 DGKDQ16760 1214 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 ODR4Q5SWX8 454 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 EPM2AIP1Q7L775 607 aaPredicted RBP21.78■■□□□ 1.08
SSBP2-218ENST00000514493 FIZ1Q96SL8 496 aa21.78■■□□□ 1.08
SSBP2-218ENST00000514493 XPO4Q9C0E2 1151 aaKnown RBP21.78■■□□□ 1.08
SSBP2-218ENST00000514493 DHX33Q9H6R0 707 aaKnown RBP21.78■■□□□ 1.08
SSBP2-218ENST00000514493 MRPL44Q9H9J2 332 aaKnown RBP21.78■■□□□ 1.08
SSBP2-218ENST00000514493 LARSQ9P2J5 1176 aaKnown RBP21.78■■□□□ 1.08
SSBP2-218ENST00000514493 SIP14410 1827 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 BICDL2A1A5D9 508 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 A6NJR5 290 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 DYNC1LI2O43237 492 aaPredicted RBP21.77■■□□□ 1.08
SSBP2-218ENST00000514493 CBFA2T2O43439 604 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 KIF20AO95235 890 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 ZNF286BP0CG31 522 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 RFC5P40937 340 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 CASP5P51878 434 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 POLGP54098 1239 aaPredicted RBP21.77■■□□□ 1.08
SSBP2-218ENST00000514493 PMS1P54277 932 aaKnown RBP21.77■■□□□ 1.08
SSBP2-218ENST00000514493 FAM102BQ5T8I3 360 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 TTI2Q6NXR4 508 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 FAM178BQ8IXR5 827 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 SPC24Q8NBT2 197 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 SCFD1Q8WVM8 642 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 KIFAP3Q92845 792 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 C16orf70Q9BSU1 422 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 GPRC5CQ9NQ84 441 aa21.77■■□□□ 1.08
SSBP2-218ENST00000514493 ZNF215Q9UL58 517 aaPredicted RBP21.77■■□□□ 1.08
SSBP2-218ENST00000514493 TRIM49BA6NDI0 452 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 EIF3DO15371 548 aaKnown RBP eCLIP21.76■■□□□ 1.07
SSBP2-218ENST00000514493 PLS3P13797 630 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 CDK11BP21127 795 aaKnown RBP21.76■■□□□ 1.07
SSBP2-218ENST00000514493 ARHGEF6Q15052 776 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 BMT2Q1RMZ1 405 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 HSP90AA4PQ58FG1 418 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 CENPPQ6IPU0 288 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 DRC7Q8IY82 874 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 TRPC6Q9Y210 931 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 UBE4BO95155 1302 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 HBP1O60381 514 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 GCNT3O95395 438 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 MYBP10242 640 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 MAPTP10636 758 aaKnown RBP21.76■■□□□ 1.07
SSBP2-218ENST00000514493 UBASH3AP57075 661 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 FOXR2Q6PJQ5 311 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 SLC7A3Q8WY07 619 aa21.76■■□□□ 1.07
SSBP2-218ENST00000514493 FRMPD3Q5JV73 1810 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms