RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 WTAPQ15007 396 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 TAF1CQ15572 869 aaPredicted RBP8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CCDC91Q7Z6B0 441 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CATIPQ7Z7H3 387 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CDAN1Q8IWY9 1227 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 CFAP61Q8NHU2 1237 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 MRRFQ96E11 262 aaKnown RBP8.14□□□□□ -1.11
CLIP1-205ENST00000514271 C7orf25Q9BPX7 421 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 EDEM3Q9BZQ6 932 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 SLC5A4Q9NY91 659 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 RLFQ13129 1914 aa8.14□□□□□ -1.11
CLIP1-205ENST00000514271 PPP1R37O75864 691 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PARP1P09874 1014 aaKnown RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 BMP3P12645 472 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 ZBED6P86452 979 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 KCNA1Q09470 495 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 CDC37Q16543 378 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 QPCTQ16769 361 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 IFIT1BQ5T764 474 aaKnown RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 GADL1Q6ZQY3 521 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 OR8K1Q8NGG5 319 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 JAKMIP2Q96AA8 810 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 CEP95Q96GE4 821 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 OSBPL9Q96SU4 736 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 TMEM109Q9BVC6 243 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PLEKHA4Q9H4M7 779 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 MROH8Q9H579 483 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SH3GLB2Q9NR46 395 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 RNF186Q9NXI6 227 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 CNOT8Q9UFF9 292 aaKnown RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 CARNS1A5YM72 827 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 BTBD19C9JJ37 291 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 MYO1FO00160 1098 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PDHXO00330 501 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PITPNM1O00562 1244 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 ZBED4O75132 1171 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 DRD4P21917 467 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SATB1Q01826 763 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 MTMR2Q13614 643 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PRKG1Q13976 671 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SLFN13Q68D06 897 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 LEKR1Q6ZMV7 388 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 GSPT2Q8IYD1 628 aaKnown RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SOCS4Q8WXH5 440 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 NHEJ1Q9H9Q4 299 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 TOMM22Q9NS69 142 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 EURLQ9NYK6 297 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 GABBR1Q9UBS5 961 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PRKAG3Q9UGI9 489 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SSU72P8A0A1W2PR75 194 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 ZBTB43O43298 467 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 RHOXF2BP0C7M4 288 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 CALRP27797 417 aaKnown RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 GRM4Q14833 912 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SPECC1Q5M775 1068 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 KIAA0895Q8NCT3 520 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 MTMR8Q96EF0 704 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SLF1Q9BQI6 1058 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 RHOXF2Q9BQY4 288 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 EMILIN3Q9NT22 766 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 ZDHHC18Q9NUE0 388 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 STIM2Q9P246 746 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 PPP1R9AQ9ULJ8 1098 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 SUFUQ9UMX1 484 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 NUB1Q9Y5A7 615 aa8.13□□□□□ -1.11
CLIP1-205ENST00000514271 CTDP1Q9Y5B0 961 aaPredicted RBP8.13□□□□□ -1.11
CLIP1-205ENST00000514271 TNKSO95271 1327 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 FRMD3A2A2Y4 597 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 B4DLN1 442 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 F5H6K3 240 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 STRNO43815 780 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 BCRP11274 1271 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 VCAM1P19320 739 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 MDH1P40925 334 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 KLK7P49862 253 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SLC8A3P57103 927 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 KLRC3Q07444 240 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 ZNF268Q14587 947 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 RRP1BQ14684 758 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 TMTC3Q6ZXV5 915 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 MOB2Q70IA6 237 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SMYD4Q8IYR2 804 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 RNF10Q8N5U6 811 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 FANCBQ8NB91 859 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 CHST13Q8NET6 341 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 MPHOSPH6Q99547 160 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 NEUROG2Q9H2A3 272 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 METTL14Q9HCE5 456 aaKnown RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 VPS54Q9P1Q0 977 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 MAGEC2Q9UBF1 373 aaPredicted RBP8.12□□□□□ -1.11
CLIP1-205ENST00000514271 RNF14Q9UBS8 474 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 CYP2D7A0A087X1C5 515 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 KLHL33A6NCF5 533 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 STAT2P52630 851 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 PLS1Q14651 629 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 CRYMQ14894 314 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 WDR78Q5VTH9 848 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 C17orf99Q6UX52 265 aa8.12□□□□□ -1.11
CLIP1-205ENST00000514271 SLC44A5Q8NCS7 719 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms