RNA–Protein interactions for RNA: ENST00000513159.5

PTPN20-227, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-227ENST00000513159 CLEC17AQ6ZS10 378 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 RPAINQ86UA6 219 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 DNAJB3Q8WWF6 145 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 DPF3Q92784 378 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 CEP170P1Q96L14 293 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 MTRQ99707 1265 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 PPP1R12CQ9BZL4 782 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 BHMT2Q9H2M3 363 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 GOLPH3LQ9H4A5 285 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 BMP2KQ9NSY1 1161 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-227ENST00000513159 TMEM39AQ9NV64 488 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 ZMYND8Q9ULU4 1186 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-227ENST00000513159 HPSEQ9Y251 543 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 TRIOBPQ9H2D6 2365 aa11.54□□□□□ -0.56
PTPN20-227ENST00000513159 RANBP2P49792 3224 aaKnown RBP11.53□□□□□ -0.56
PTPN20-227ENST00000513159 SMIM35A0A1B0GVV1 85 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 TLR3O15455 904 aaKnown RBP11.53□□□□□ -0.56
PTPN20-227ENST00000513159 SLC26A4O43511 780 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 GADD45BO75293 160 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-227ENST00000513159 CHRNA1P02708 482 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 CKBP12277 381 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 CMA1P23946 247 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 TBC1D8BQ0IIM8 1120 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 MAPK7Q13164 816 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 MCM6Q14566 821 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 TCTN1Q2MV58 587 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 RINT1Q6NUQ1 792 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 EFCAB12Q6NXP0 572 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 PADI6Q6TGC4 694 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 C1orf186Q6ZWK4 172 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 DAW1Q8N136 415 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 PDILTQ8N807 584 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 SYT2Q8N9I0 419 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-227ENST00000513159 TMEM87AQ8NBN3 555 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 RAD54LQ92698 747 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 SCLYQ96I15 445 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 RUSC1Q9BVN2 902 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 FAM49AQ9H0Q0 323 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-227ENST00000513159 GPRC5CQ9NQ84 441 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 PRDM5Q9NQX1 630 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-227ENST00000513159 STK24Q9Y6E0 443 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 KDM3AQ9Y4C1 1321 aa11.53□□□□□ -0.56
PTPN20-227ENST00000513159 NPHP3-ACAD11A0A0J9YXS1 232 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 A0A1B0GVL5 298 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 A0A1W2PQ27 194 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 A0A1W2PQ64 194 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 A0A1W2PQD8 194 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 MAGEB2O15479 319 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 GPR32O75388 356 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 TIMP1P01033 207 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 VTNP04004 478 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 IQCF3P0C7M6 154 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 PLA2G4BP0C869 781 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 GNAT1P11488 350 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 ARL2P36404 184 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 EPHB4P54760 987 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 CCL23P55773 120 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 TMEM62Q0P6H9 643 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 EMC2Q15006 297 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 FAM26DQ5JW98 314 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 TAF2Q6P1X5 1199 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 C16orf59Q7L2K0 433 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 OTUD6AQ7L8S5 288 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 KSR1Q8IVT5 923 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 TMEM40Q8WWA1 233 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 BSNDQ8WZ55 320 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 TMEM143Q96AN5 459 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 ZNF668Q96K58 619 aaPredicted RBP11.52□□□□□ -0.57
PTPN20-227ENST00000513159 NT5C3AQ9H0P0 336 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 ADAMTS10Q9H324 1103 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 HIPK3Q9H422 1215 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 SUGCTQ9HAC7 445 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 DNM3Q9UQ16 869 aa11.52□□□□□ -0.57
PTPN20-227ENST00000513159 H0YGN5 161 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 PITPNM1O00562 1244 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 USO1O60763 962 aaKnown RBP11.51□□□□□ -0.57
PTPN20-227ENST00000513159 NBNO60934 754 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 DGAT1O75907 488 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 CTSHP09668 335 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 PFKFB1P16118 471 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 CYP11B2P19099 503 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 THPOP40225 353 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 NDUFA8P51970 172 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 MLLT1Q03111 559 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-227ENST00000513159 KCTD17Q8N5Z5 321 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 METTL13Q8N6R0 699 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 ENGASEQ8NFI3 743 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 CAGE1Q8TC20 777 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 ASAP3Q8TDY4 903 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 BADQ92934 168 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 CALML4Q96GE6 196 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 PPP1R16BQ96T49 567 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 NOD1Q9Y239 953 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 PPME1Q9Y570 386 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 TTC3P53804 2025 aa11.51□□□□□ -0.57
PTPN20-227ENST00000513159 TRIP11Q15643 1979 aa11.5□□□□□ -0.57
PTPN20-227ENST00000513159 ARHGEF35A5YM69 484 aa11.5□□□□□ -0.57
PTPN20-227ENST00000513159 MYMKA6NI61 221 aa11.5□□□□□ -0.57
PTPN20-227ENST00000513159 RSPH10B2B2RC85 870 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms