RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 JAKMIP3Q5VZ66 844 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 CKAP2LQ8IYA6 745 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 REXO1Q8N1G1 1221 aaKnown RBP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 RASGRP4Q8TDF6 673 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 MICAL1Q8TDZ2 1067 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 ZBTB10Q96DT7 871 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 PGBD1Q96JS3 809 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 PHF7Q9BWX1 381 aaPredicted RBP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 C22orf23Q9BZE7 217 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM117Q9H0C3 514 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 NGRNQ9NPE2 291 aaKnown RBP14.24□□□□□ -0.13
VEGFA-216ENST00000512683 TLR9Q9NR96 1032 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 GINS2Q9Y248 185 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 SNX14Q9Y5W7 946 aa14.24□□□□□ -0.13
VEGFA-216ENST00000512683 TBKBP1A7MCY6 615 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 LOC730098B7Z3J9 87 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 FGF18O76093 207 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 ZSCAN20P17040 1043 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-216ENST00000512683 GTF2F1P35269 517 aaKnown RBP eCLIP14.23□□□□□ -0.139e-23■■■□□ 16.4
VEGFA-216ENST00000512683 PPM1AP35813 382 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 NRIP1P48552 1158 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 KRT17Q04695 432 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 DSC3Q14574 896 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM266Q2M3C6 531 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 PAN2Q504Q3 1202 aaKnown RBP14.23□□□□□ -0.13
VEGFA-216ENST00000512683 FAM177A1Q8N128 213 aaPredicted RBP14.23□□□□□ -0.13
VEGFA-216ENST00000512683 CCDC148Q8NFR7 591 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM40Q8WWA1 233 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 MAP7D2Q96T17 732 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 RIT2Q99578 217 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 CDHR5Q9HBB8 845 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 TYW1Q9NV66 732 aaKnown RBP14.23□□□□□ -0.13
VEGFA-216ENST00000512683 TMEM260Q9NX78 707 aa14.23□□□□□ -0.13
VEGFA-216ENST00000512683 WDR64B1ANS9 1081 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 RBAK-RBAKDNI3L0D1 243 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 DDX39AO00148 427 aaKnown RBP14.22□□□□□ -0.13
VEGFA-216ENST00000512683 LINC01565O15544 149 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 MGEA5O60502 916 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 EOMESO95936 686 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 HOXB8P17481 243 aaPredicted RBP14.22□□□□□ -0.13
VEGFA-216ENST00000512683 EIF4BP23588 611 aaKnown RBP14.22□□□□□ -0.13
VEGFA-216ENST00000512683 SFNP31947 248 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 BMS1Q14692 1282 aaKnown RBP14.22□□□□□ -0.13
VEGFA-216ENST00000512683 CLUL1Q15846 466 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 DUSP6Q16828 381 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 KIZQ2M2Z5 673 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 METTL13Q8N6R0 699 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 RDM1Q8NG50 284 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 JAKMIP1Q96N16 626 aaKnown RBP14.22□□□□□ -0.13
VEGFA-216ENST00000512683 RNF26Q9BY78 433 aaPredicted RBP14.22□□□□□ -0.13
VEGFA-216ENST00000512683 SH3GLB2Q9NR46 395 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 NID2Q14112 1375 aa14.22□□□□□ -0.13
VEGFA-216ENST00000512683 WDR81Q562E7 1941 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 MYO7AQ13402 2215 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 FSCN2O14926 492 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 EPB41L2O43491 1005 aaKnown RBP14.21□□□□□ -0.13
VEGFA-216ENST00000512683 PSMA5P28066 241 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 APOBRQ0VD83 1088 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 PRR16Q569H4 304 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 FAM102BQ5T8I3 360 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 EFCAB12Q6NXP0 572 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 TRIM67Q6ZTA4 783 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 Q6ZUG5 572 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 HFE2Q6ZVN8 426 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 FAM228AQ86W67 206 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 THNSL1Q8IYQ7 743 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 LINC01465Q8N7H1 131 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 COLGALT1Q8NBJ5 622 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 SUSD6Q92537 303 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 MRPS27Q92552 414 aaKnown RBP14.21□□□□□ -0.13
VEGFA-216ENST00000512683 AGXT2Q9BYV1 514 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 ADAMTS10Q9H324 1103 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 CWH43Q9H720 699 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 CHST12Q9NRB3 414 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 GABBR1Q9UBS5 961 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 MUTYHQ9UIF7 546 aa14.21□□□□□ -0.13
VEGFA-216ENST00000512683 A0A0U1RQF3 1178 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 PPFIA3O75145 1194 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 IFNAR1P17181 557 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 JAK3P52333 1124 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 EVCP57679 992 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 NLRP11P59045 1033 aaKnown RBP14.2□□□□□ -0.14
VEGFA-216ENST00000512683 KCNC3Q14003 757 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 ADGRD2Q7Z7M1 963 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 RBM23Q86U06 439 aaKnown RBP14.2□□□□□ -0.14
VEGFA-216ENST00000512683 ABI1Q8IZP0 508 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 FBXL18Q96ME1 805 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 OSMRQ99650 979 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 TRAIPQ9BWF2 469 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 IRF2BPLQ9H1B7 796 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 DISC1Q9NRI5 854 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 DACT1Q9NYF0 836 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 NAP1L2Q9ULW6 460 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-216ENST00000512683 USP15Q9Y4E8 981 aaPredicted RBP14.2□□□□□ -0.14
VEGFA-216ENST00000512683 SAMM50Q9Y512 469 aa14.2□□□□□ -0.14
VEGFA-216ENST00000512683 LOXHD1Q8IVV2 1947 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 REC8O95072 547 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 GLP2RO95838 553 aa14.19□□□□□ -0.14
VEGFA-216ENST00000512683 SKIP12755 728 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms