RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 SSH1Q8WYL5 1049 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 PLEKHA8Q96JA3 519 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 PRRG4Q9BZD6 226 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 AIPL1Q9NZN9 384 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 L3MBTL1Q9Y468 752 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ZNF24P17028 368 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 PSMC1P62191 440 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 PRKAA1Q13131 559 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 PAK2Q13177 524 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ZNF667Q5HYK9 610 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 LMBRD2Q68DH5 695 aaPredicted RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 RD3Q7Z3Z2 195 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 GYG1P46976 350 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 SRSF11Q05519 484 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 TCEAL5Q5H9L2 206 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 GLB1LQ6UWU2 654 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 KSR1Q8IVT5 923 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ERO1AQ96HE7 468 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 CLIC2O15247 247 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ENO2P09104 434 aaPredicted RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 PEX5P50542 639 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 NCAPHQ15003 741 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 SLC27A3Q5K4L6 730 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 SLFN12LQ6IEE8 588 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 SNRNP48Q6IEG0 339 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 ESRP1Q6NXG1 681 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 VPS37AQ8NEZ2 397 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 TTC8Q8TAM2 541 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 MKNK1Q9BUB5 465 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 USP26Q9BXU7 913 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 STK33Q9BYT3 514 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 MYLK2Q9H1R3 596 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 KANSL2Q9H9L4 492 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ATP6V0A4Q9HBG4 840 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 ZC3H7BQ9UGR2 993 aaKnown RBP9.54□□□□□ -0.88
VCAN-208ENST00000512590 TNFSF13BQ9Y275 285 aa9.54□□□□□ -0.88
VCAN-208ENST00000512590 MYO1FO00160 1098 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 TTLL1O95922 423 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 YWHAQP27348 245 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 BASP1P80723 227 aaKnown RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 PDIA6Q15084 440 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 ANKRD40Q6AI12 368 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 TBC1D1Q86TI0 1168 aaPredicted RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 COMMD2Q86X83 199 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 JAMLQ86YT9 394 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 BBS7Q8IWZ6 715 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 ZNF614Q8N883 585 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 ZBTB9Q96C00 473 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 DTNBP1Q96EV8 351 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 NUP85Q9BW27 656 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 SYBUQ9NX95 663 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 CFAP99D6REC4 459 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 K7ERI5 159 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 GPAA1O43292 621 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 PCDH8O95206 1070 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 URODP06132 367 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 NKX1-1Q15270 411 aaPredicted RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 NLRP9Q7RTR0 991 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 UNC5CLQ8IV45 518 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 FRMD6Q96NE9 622 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 ASCC2Q9H1I8 757 aaPredicted RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 ARMCX3Q9UH62 379 aaPredicted RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 TSKSQ9UJT2 592 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 PIN4Q9Y237 131 aaKnown RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 PRG3Q9Y2Y8 225 aaPredicted RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 TARSL2A2RTX5 802 aaKnown RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 ZBED1O96006 694 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 CETPP11597 493 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 NME3Q13232 169 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 ACAP2Q15057 778 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 TCP11X2Q5H9J9 407 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 TOGARAM2Q6ZUX3 1019 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 MMGT1Q8N4V1 131 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 SLF1Q9BQI6 1058 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 CCL15-CCL14A0A0B4J2E2 113 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 DFFAO00273 331 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 TOM1L1O75674 476 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 ASNSP08243 561 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 MYBL2P10244 700 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 PRAMEP78395 509 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 CCL15Q16663 113 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 KIZQ2M2Z5 673 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 RRAGAQ7L523 313 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 RHPN2Q8IUC4 686 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 PASD1Q8IV76 773 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 APPBP2Q92624 585 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 CENPTQ96BT3 561 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 SIK2Q9H0K1 926 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 PCMTD2Q9NV79 361 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 DNAJC17Q9NVM6 304 aaKnown RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 PSD3Q9NYI0 1048 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 CAPN11Q9UMQ6 739 aa9.53□□□□□ -0.88
VCAN-208ENST00000512590 RPRD2Q5VT52 1461 aaKnown RBP9.53□□□□□ -0.88
VCAN-208ENST00000512590 DYNC1LI2O43237 492 aaPredicted RBP9.52□□□□□ -0.88
VCAN-208ENST00000512590 CTSEP14091 401 aa9.52□□□□□ -0.88
VCAN-208ENST00000512590 MZF1P28698 734 aaPredicted RBP9.52□□□□□ -0.88
VCAN-208ENST00000512590 CTSWP56202 376 aa9.52□□□□□ -0.88
VCAN-208ENST00000512590 SGCGQ13326 291 aa9.52□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms