RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 MAP3K21Q5TCX8 1036 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 TMEM132EQ6IEE7 984 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 LRRC71Q8N4P6 559 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZSCAN1Q8NBB4 408 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 PPP1R9BQ96SB3 815 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 LRFN1Q9P244 771 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 L1RE1Q9UN81 338 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ABCC10Q5T3U5 1492 aa6.99□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZCCHC11Q5TAX3 1644 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ITSN2Q9NZM3 1697 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZSCAN5CA6NGD5 496 aaPredicted RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 SRGAP2O75044 1071 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 SASH1O94885 1247 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 GSNP06396 782 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 RLBP1P12271 317 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 IGFALSP35858 605 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ADH7P40394 386 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ERVK-9P63128 1117 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 AGERQ15109 404 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 TSTQ16762 297 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF674Q2M3X9 581 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 IZUMO3Q5VZ72 239 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 NPNTQ6UXI9 565 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF804AQ7Z570 1209 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CCDC91Q7Z6B0 441 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CHD1LQ86WJ1 897 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 TEKT1Q969V4 418 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZUFSPQ96AP4 578 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ARL8AQ96BM9 186 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 TMEM169Q96HH4 297 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 MAELQ96JY0 434 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 SLC39A3Q9BRY0 314 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CNTD2Q9H8S5 307 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 TRAK1Q9UPV9 953 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CNPY2Q9Y2B0 182 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 FLT1P17948 1338 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 GPATCH8Q9UKJ3 1502 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 TUSC2O75896 110 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ACPPP15309 386 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CD44P16070 742 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 RHOQP17081 205 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 HDCP19113 662 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 GPR85P60893 370 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 BTKQ06187 659 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 NSUN2Q08J23 767 aaKnown RBP eCLIP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 WDR73Q6P4I2 378 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 LBX2Q6XYB7 198 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF280CQ8ND82 737 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ARMC2Q8NEN0 867 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CHTF18Q8WVB6 975 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 USP6NLQ92738 828 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CLMNQ96JQ2 1002 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 AARSD1Q9BTE6 412 aaKnown RBP6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 DACH1Q9UI36 760 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 KCNMB2Q9Y691 235 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 ASXL2Q76L83 1435 aa6.98□□□□□ -1.29
TRAPPC11-209ENST00000512476 CCDC196A0A1B0GTZ2 297 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 H0Y626 953 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ATXN7O15265 892 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 CYP1A2P05177 515 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 GRNP28799 593 aaKnown RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 PFKFB4Q16877 469 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAM110CQ1W6H9 321 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 HSF5Q4G112 596 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 C1orf141Q5JVX7 400 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 IL27RAQ6UWB1 636 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ISLR2Q6UXK2 745 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 NCAPG2Q86XI2 1143 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 POTEDQ86YR6 584 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 OR8H3Q8N146 312 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 DDX18Q9NVP1 670 aaKnown RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 HPF1Q9NWY4 346 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ANGPTL3Q9Y5C1 460 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 PTPRKQ15262 1439 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 LRRC72A6NJI9 287 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAM227AF5H4B4 570 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ENDOD1O94919 500 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 LARGE1O95461 756 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 CRTAMO95727 393 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ITGAVP06756 1048 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 C6P13671 934 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ALAS2P22557 587 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 C19orf57Q0VDD7 668 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 FAAP100Q0VG06 881 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 LRP8Q14114 963 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 NSMFQ6X4W1 530 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 ZNF783Q6ZMS7 281 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 CCDC116Q8IYX3 515 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 KCTD6Q8NC69 237 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 TDRD7Q8NHU6 1098 aaKnown RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 KRT35Q92764 455 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 RUNDC3BQ96NL0 473 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 NECAB3Q96P71 396 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 BCL2L12Q9HB09 334 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 PRDM5Q9NQX1 630 aaPredicted RBP6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 KRT84Q9NSB2 600 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 KIF17Q9P2E2 1029 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 RPS6KA6Q9UK32 745 aa6.97□□□□□ -1.29
TRAPPC11-209ENST00000512476 PPM1HQ9ULR3 514 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms