RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 C16orf86Q6ZW13 317 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 CEP68Q76N32 757 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 TXNDC5Q8NBS9 432 aaKnown RBP5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 CHST13Q8NET6 341 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 PHF20Q9BVI0 1012 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 MTFR1LQ9H019 292 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 INVSQ9Y283 1065 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 ZNF536O15090 1300 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 ARHGAP31Q2M1Z3 1444 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 ADGRL3Q9HAR2 1447 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 C1orf167Q5SNV9 1468 aa5.11□□□□□ -1.59
TOPBP1-208ENST00000511439 HGSO14964 777 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 MAFKO60675 156 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 MSCO60682 206 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 EFCAB14O75071 495 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 PCNTO95613 3336 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 ASMTLO95671 621 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 FPR2P25090 351 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 HSD3B2P26439 372 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 RGS19P49795 217 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 GPR85P60893 370 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 TCEA2Q15560 299 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 PLCH1Q4KWH8 1693 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 FNDC3BQ53EP0 1204 aaKnown RBP5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 PLEKHG4Q58EX7 1191 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 PRAMEF18Q5VWM3 479 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 KIAA0907Q7Z7F0 614 aaPredicted RBP5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 FAM26EQ8N5C1 309 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 GSTCDQ8NEC7 633 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 SLC7A14Q8TBB6 771 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 CLIC6Q96NY7 704 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 SLC52A2Q9HAB3 445 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 TRAF6Q9Y4K3 522 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 PCDHA2Q9Y5H9 948 aa5.1□□□□□ -1.59
TOPBP1-208ENST00000511439 THSD7AQ9UPZ6 1657 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 ADGRL2O95490 1459 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 MTUS2Q5JR59 1369 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 DDX3XO00571 662 aaKnown RBP eCLIP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 AQP7O14520 342 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 LAMTOR5O43504 91 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 RFPL3O75679 317 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 CYP1A1P04798 512 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 ZNF20P17024 532 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 BCL6P41182 706 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 LSAMPQ13449 338 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 TKFCQ3LXA3 575 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 LBX2Q6XYB7 198 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 IFNL3Q8IZI9 196 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 DVL3Q92997 716 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 TOE1Q96GM8 510 aaKnown RBP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 C8orf49Q96NF6 230 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 CLUHP3Q96NS8 147 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 PDGFDQ9GZP0 370 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 CDIP1Q9H305 208 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 L2HGDHQ9H9P8 463 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 DTLQ9NZJ0 730 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 CFDP1Q9UEE9 299 aaPredicted RBP5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 FBXL7Q9UJT9 491 aa5.09□□□□□ -1.59
TOPBP1-208ENST00000511439 CEP152O94986 1710 aa5.09□□□□□ -1.6
TOPBP1-208ENST00000511439 ZFYVE9O95405 1425 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 NPHP3Q7Z494 1330 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 ZNF28P17035 718 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 TNFRSF1AP19438 455 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 STAT5AP42229 794 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 ADAM9Q13443 819 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 CR1LQ2VPA4 569 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 EMC4Q5J8M3 183 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 EGFLAMQ63HQ2 1017 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 STK32CQ86UX6 486 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 NLRP10Q86W26 655 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 PHOSPHO1Q8TCT1 267 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 ABHD8Q96I13 439 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 CHAMP1Q96JM3 812 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 TMEM209Q96SK2 561 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 CDK5RAP1Q96SZ6 601 aaKnown RBP5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 FEZ1Q99689 392 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 TMEM168Q9H0V1 697 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 EPB41L1Q9H4G0 881 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 TRIM39Q9HCM9 518 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 NDOR1Q9UHB4 597 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 SFMBT1Q9UHJ3 866 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 PCDHB4Q9Y5E5 795 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 CD2APQ9Y5K6 639 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 RGPD3A6NKT7 1758 aaPredicted RBP5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 RGPD4Q7Z3J3 1758 aa5.08□□□□□ -1.6
TOPBP1-208ENST00000511439 CCDC18Q5T9S5 1454 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 PXDNQ92626 1479 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 ADAMTS13Q76LX8 1427 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 DGKIO75912 1065 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 CRTAMO95727 393 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 ZXDAP98168 799 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 PABPC4Q13310 644 aaKnown RBP eCLIP5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 KIZQ2M2Z5 673 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 STEAP3Q658P3 488 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 BRAPQ7Z569 592 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 SCLYQ96I15 445 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 KRTAP3-1Q9BYR8 98 aa5.07□□□□□ -1.6
TOPBP1-208ENST00000511439 PCDHA8Q9Y5H6 950 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms