RNA–Protein interactions for RNA: ENST00000509857.5

TRAPPC11-206, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-206ENST00000509857 TGM5O43548 720 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 LRRC32Q14392 662 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 RGL3Q3MIN7 710 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 GPR158Q5T848 1215 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 LRSAM1Q6UWE0 723 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 ZZZ3Q8IYH5 903 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 SYT8Q8NBV8 401 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 NUDT10Q8NFP7 164 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 CALML6Q8TD86 181 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 MBD6Q96DN6 1003 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 NUDT11Q96G61 164 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 TMEM168Q9H0V1 697 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 ZMAT4Q9H898 229 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 PARD6AQ9NPB6 346 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 MTUS2Q5JR59 1369 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 NUP160Q12769 1436 aa9.48□□□□□ -0.89
TRAPPC11-206ENST00000509857 KIAA0556O60303 1618 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 SASH1O94885 1247 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 FKBP9O95302 570 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 PRLP01236 227 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 GJA9P57773 515 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 IL2P60568 153 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 PHC1P78364 1004 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 SMAD3P84022 425 aaKnown RBP9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 MCTP2Q6DN12 878 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 FKBP9P1Q75LS8 142 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 GPR101Q96P66 508 aaPredicted RBP9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 XYLT2Q9H1B5 865 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 TOMM22Q9NS69 142 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 SPTLC3Q9NUV7 552 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 DHX57Q6P158 1386 aaKnown RBP9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 FGD6Q6ZV73 1430 aa9.47□□□□□ -0.89
TRAPPC11-206ENST00000509857 ZEB2O60315 1214 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 ADCY1Q08828 1119 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 NT5DC1Q5TFE4 455 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 ZNF662Q6ZS27 426 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 STRA8Q7Z7C7 330 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 PASD1Q8IV76 773 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 KLHL36Q8N4N3 616 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 UBR7Q8N806 425 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 ERCC4Q92889 916 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 USP7Q93009 1102 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 LCORQ96JN0 433 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 FBXO10Q9UK96 956 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 SETD5Q9C0A6 1442 aa9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 ARID1BQ8NFD5 2236 aaPredicted RBP9.46□□□□□ -0.9
TRAPPC11-206ENST00000509857 CYP1A1P04798 512 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 TOP3AQ13472 1001 aaPredicted RBP9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 TTC38Q5R3I4 469 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 Q6ZUG5 572 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 REXO1L1PQ8IX06 675 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 AJUBAQ96IF1 538 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 MAML3Q96JK9 1138 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 KATNBL1Q9H079 304 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 ZCCHC4Q9H5U6 513 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 IFT22Q9H7X7 185 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 SPC25Q9HBM1 224 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 EMC7Q9NPA0 242 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 ADAM29Q9UKF5 820 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 MYOM3Q5VTT5 1437 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 MIA2Q96PC5 1412 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 DISP1Q96F81 1524 aa9.45□□□□□ -0.9
TRAPPC11-206ENST00000509857 UBA6A0AVT1 1052 aaPredicted RBP9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 MROH6A6NGR9 719 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 CUTAO60888 179 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 DNAJC6O75061 913 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 APEX1P27695 318 aaKnown RBP9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 POLD1P28340 1107 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 ROM1Q03395 351 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 WDR72Q3MJ13 1102 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 C11orf74Q86VG3 221 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 FEZF2Q8TBJ5 459 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 TTC1Q99614 292 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 AKNAQ7Z591 1439 aa9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 TCOF1Q13428 1488 aaKnown RBP9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 EPRSP07814 1512 aaKnown RBP9.44□□□□□ -0.9
TRAPPC11-206ENST00000509857 LRRIQ1Q96JM4 1722 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 NCOA2Q15596 1464 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 NEMP1O14524 444 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 POU3F3P20264 500 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 CD40P25942 277 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 SLC6A3Q01959 620 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 KIAA2012Q0VF49 1180 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 STRN3Q13033 797 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 TERF2Q15554 542 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 CT47A1Q5JQC4 288 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 RNF187Q5TA31 235 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 KRTAP1-3Q8IUG1 177 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 ZNF610Q8N9Z0 462 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 BARX1Q9HBU1 254 aaPredicted RBP9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 USP36Q9P275 1121 aaKnown RBP9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 RAPGEFL1Q9UHV5 662 aa9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 APOBEC2Q9Y235 224 aaKnown RBP9.43□□□□□ -0.9
TRAPPC11-206ENST00000509857 OTOL1A6NHN0 477 aaPredicted RBP9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 BRINP1O60477 761 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 EYA4O95677 639 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 INHBBP09529 407 aa9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 CANXP27824 592 aaKnown RBP9.42□□□□□ -0.9
TRAPPC11-206ENST00000509857 ETV4P43268 484 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms