RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CPLX2Q6PUV4 134 aaKnown RBP16.49■□□□□ 0.23
HMGCL-208ENST00000509389 PHKBQ93100 1093 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 RNF26Q9BY78 433 aaPredicted RBP16.49■□□□□ 0.23
HMGCL-208ENST00000509389 CDHR5Q9HBB8 845 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 ERVK-5Q9HDB9 667 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 ALG13Q9NP73 1137 aaKnown RBP16.49■□□□□ 0.23
HMGCL-208ENST00000509389 C11orf16Q9NQ32 467 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 TBC1D22BQ9NU19 505 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 PLAGL2Q9UPG8 496 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 GINS2Q9Y248 185 aa16.49■□□□□ 0.23
HMGCL-208ENST00000509389 NOC2LQ9Y3T9 749 aaKnown RBP16.49■□□□□ 0.23
HMGCL-208ENST00000509389 CPLX1O14810 134 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 MMP1P03956 469 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 GNA11P29992 359 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 SSTR3P32745 418 aaPredicted RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 LTBRP36941 435 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 GATMP50440 423 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 SETQ01105 290 aaPredicted RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 HYAL1Q12794 435 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 NFX1Q12986 1120 aaKnown RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 CAMK1Q14012 370 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 CTC1Q2NKJ3 1217 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 PAN2Q504Q3 1202 aaKnown RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 ZNF746Q6NUN9 644 aaPredicted RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 RASGRP4Q8TDF6 673 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 TMEM40Q8WWA1 233 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 P2RX5Q93086 422 aa16.48■□□□□ 0.23
HMGCL-208ENST00000509389 ORC3Q9UBD5 711 aaPredicted RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 MAFBQ9Y5Q3 323 aaPredicted RBP16.48■□□□□ 0.23
HMGCL-208ENST00000509389 MGEA5O60502 916 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 GPR37L1O60883 481 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 PPFIA3O75145 1194 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 RPS6KA5O75582 802 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 CSPG5O95196 566 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 ITGB1P05556 798 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 SARSP49591 514 aaKnown RBP16.47■□□□□ 0.23
HMGCL-208ENST00000509389 AKAP17AQ02040 695 aaKnown RBP16.47■□□□□ 0.23
HMGCL-208ENST00000509389 PRR16Q569H4 304 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 NAALADL2Q58DX5 795 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 LARP1BQ659C4 914 aaKnown RBP16.47■□□□□ 0.23
HMGCL-208ENST00000509389 CKAP2LQ8IYA6 745 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
HMGCL-208ENST00000509389 LRFN2Q9ULH4 789 aa16.47■□□□□ 0.23
HMGCL-208ENST00000509389 FNDC1Q4ZHG4 1894 aaPredicted RBP16.46■□□□□ 0.23
HMGCL-208ENST00000509389 FAM86C2PA6NEL3 165 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 DTNBO60941 627 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 C22orf31O95567 290 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 F13A1P00488 732 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
HMGCL-208ENST00000509389 DNAJB1P25685 340 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 CIITAP33076 1130 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 GTF2F1P35269 517 aaKnown RBP eCLIP16.46■□□□□ 0.23
HMGCL-208ENST00000509389 DLX2Q07687 328 aaPredicted RBP16.46■□□□□ 0.23
HMGCL-208ENST00000509389 TRMT1LQ7Z2T5 733 aaKnown RBP16.46■□□□□ 0.23
HMGCL-208ENST00000509389 SMAP1Q8IYB5 467 aaPredicted RBP16.46■□□□□ 0.23
HMGCL-208ENST00000509389 KLHL23Q8NBE8 558 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 SLC26A6Q9BXS9 759 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 GABBR1Q9UBS5 961 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 ST3GAL5Q9UNP4 418 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 FAM50BQ9Y247 325 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 PCDHA10Q9Y5I2 948 aa16.46■□□□□ 0.23
HMGCL-208ENST00000509389 PLXNA4Q9HCM2 1894 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 EDIL3O43854 480 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 DEXIO95424 95 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 PSAPP07602 524 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 CRYBB1P53674 252 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-208ENST00000509389 KIZQ2M2Z5 673 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 ODR4Q5SWX8 454 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 FAM43BQ6ZT52 329 aaPredicted RBP16.45■□□□□ 0.22
HMGCL-208ENST00000509389 FAM184AQ8NB25 1140 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 CCDC148Q8NFR7 591 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 BICD2Q8TD16 824 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 LENG9Q96B70 501 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 PPP1R16BQ96T49 567 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 ADAM2Q99965 735 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 IGFLR1Q9H665 355 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 RGS18Q9NS28 235 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 VPS54Q9P1Q0 977 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 TCEAL9Q9UHQ7 104 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 PCDHB7Q9Y5E2 793 aa16.45■□□□□ 0.22
HMGCL-208ENST00000509389 GPR182O15218 404 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 LINC01565O15544 149 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 VTNP04004 478 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 PLA2G5P39877 138 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 ZP2Q05996 745 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 CLUL1Q15846 466 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 FAM228AQ86W67 206 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 METTL13Q8N6R0 699 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 FBXO18Q8NFZ0 1043 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 OSMRQ99650 979 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 C1orf112Q9NSG2 853 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 PRKAG3Q9UGI9 489 aa16.44■□□□□ 0.22
HMGCL-208ENST00000509389 DENND3A2RUS2 1198 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 C9IYK1 514 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 MSH4O15457 936 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 TBX10O75333 385 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 GPR32O75388 356 aa16.43■□□□□ 0.22
HMGCL-208ENST00000509389 BAG4O95429 457 aaKnown RBP16.43■□□□□ 0.22
HMGCL-208ENST00000509389 IRS1P35568 1242 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms