RNA–Protein interactions for RNA: ENST00000509388.5

RNF4-213, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-213ENST00000509388 MARCH8Q5T0T0 291 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 SYT2Q8N9I0 419 aaPredicted RBP16.5■□□□□ 0.23
RNF4-213ENST00000509388 MCPH1Q8NEM0 835 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 MAP7D2Q96T17 732 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 LRRC27Q9C0I9 530 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 PRDM5Q9NQX1 630 aaPredicted RBP16.5■□□□□ 0.23
RNF4-213ENST00000509388 TMEM39AQ9NV64 488 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 PRKAG2Q9UGJ0 569 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 USP25Q9UHP3 1055 aa16.5■□□□□ 0.23
RNF4-213ENST00000509388 A0A087X0B3 334 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 SMIM35A0A1B0GVV1 85 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 GAS2O43903 313 aaKnown RBP16.49■□□□□ 0.23
RNF4-213ENST00000509388 EVI5O60447 810 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 GADD45BO75293 160 aaPredicted RBP16.49■□□□□ 0.23
RNF4-213ENST00000509388 CD4P01730 458 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 CLTBP09497 229 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 THPOP40225 353 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 ADAM17P78536 824 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 AMPD3Q01432 767 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 BFSP2Q13515 415 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 EMC2Q15006 297 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 MAEAQ7L5Y9 396 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 SERINC5Q86VE9 423 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 LRRC71Q8N4P6 559 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 TCP11Q8WWU5 503 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 ZBTB10Q96DT7 871 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 DHX33Q9H6R0 707 aaKnown RBP16.49■□□□□ 0.23
RNF4-213ENST00000509388 MAGEF1Q9HAY2 307 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 BLOC1S4Q9NUP1 217 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 KCND2Q9NZV8 630 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 AKT3Q9Y243 479 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 HPSEQ9Y251 543 aa16.49■□□□□ 0.23
RNF4-213ENST00000509388 FAM237AA0A1B0GTK4 181 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 M0QZ92 97 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 CYP11B2P19099 503 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 CLCN3P51790 818 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 SLC12A3P55017 1021 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 FAAP100Q0VG06 881 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 FAM102BQ5T8I3 360 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 IER5Q5VY09 327 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 RINT1Q6NUQ1 792 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 GPBP1Q86WP2 473 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 NME8Q8N427 588 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 CNNM3Q8NE01 707 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 DNAJB3Q8WWF6 145 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 CEP89Q96ST8 783 aa16.48■□□□□ 0.23
RNF4-213ENST00000509388 SUCLA2Q9P2R7 463 aaPredicted RBP16.48■□□□□ 0.23
RNF4-213ENST00000509388 SCN10AQ9Y5Y9 1956 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 IGKV6-21A0A0C4DH24 114 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 ZNF202O95125 648 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 CDC42EP1Q00587 391 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 FAM160A1Q05DH4 1040 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 E2F4Q16254 413 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 NAALADL2Q58DX5 795 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 RUFY4Q6ZNE9 571 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 C7orf61Q8IZ16 206 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 CAGE1Q8TC20 777 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 PSPC1Q8WXF1 523 aaKnown RBP16.47■□□□□ 0.23
RNF4-213ENST00000509388 TMEM143Q96AN5 459 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 TIPINQ9BVW5 301 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 TNMDQ9H2S6 317 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 GOLPH3LQ9H4A5 285 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 SERTAD1Q9UHV2 236 aa16.47■□□□□ 0.23
RNF4-213ENST00000509388 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.46■□□□□ 0.23
RNF4-213ENST00000509388 KINO60870 393 aaKnown RBP16.46■□□□□ 0.23
RNF4-213ENST00000509388 CAND2O75155 1236 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 SLFN14P0C7P3 912 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 RAD51AP2Q09MP3 1159 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 LONRF3Q496Y0 759 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 KANK3Q6NY19 840 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 C1orf186Q6ZWK4 172 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 KIAA0319LQ8IZA0 1049 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 LRRC15Q8TF66 581 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 DRC1Q96MC2 740 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 SCLT1Q96NL6 688 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 RUSC1Q9BVN2 902 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 HIPK3Q9H422 1215 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 ZHX3Q9H4I2 956 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 GINS2Q9Y248 185 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 NR2E3Q9Y5X4 410 aa16.46■□□□□ 0.23
RNF4-213ENST00000509388 ASAP2O43150 1006 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 TBCAO75347 108 aaKnown RBP16.45■□□□□ 0.22
RNF4-213ENST00000509388 CTSHP09668 335 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 RAG1P15918 1043 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 GUCY2CP25092 1073 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 AFMP43652 599 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 TMEM62Q0P6H9 643 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 MXD4Q14582 209 aaPredicted RBP16.45■□□□□ 0.22
RNF4-213ENST00000509388 RHPN2Q8IUC4 686 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 FMR1NBQ8N0W7 255 aaPredicted RBP16.45■□□□□ 0.22
RNF4-213ENST00000509388 ZNF710Q8N1W2 664 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 STAMQ92783 540 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 KIFAP3Q92845 792 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 IFT74Q96LB3 600 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 CTAGE1Q96RT6 745 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 PPP1R12CQ9BZL4 782 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 POLR3FQ9H1D9 316 aaPredicted RBP16.45■□□□□ 0.22
RNF4-213ENST00000509388 XPNPEP1Q9NQW7 623 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 PDLIM7Q9NR12 457 aa16.45■□□□□ 0.22
RNF4-213ENST00000509388 LMBRD1Q9NUN5 540 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms