RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 GRIN2CQ14957 1233 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 ZNF697Q5TEC3 545 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 MCTP1Q6DN14 999 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 C4orf19Q8IY42 314 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 METTL13Q8N6R0 699 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 PHOSPHO2Q8TCD6 241 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 OSMRQ99650 979 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 CEP131Q9UPN4 1083 aa20.38■□□□□ 0.85
CLDND1-220ENST00000508902 NOC2LQ9Y3T9 749 aaKnown RBP20.38■□□□□ 0.85
CLDND1-220ENST00000508902 MAGEB2O15479 319 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 MARCH6O60337 910 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 MGEA5O60502 916 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 CA3P07451 260 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 GNL2Q13823 731 aaKnown RBP20.37■□□□□ 0.85
CLDND1-220ENST00000508902 ECM1Q16610 540 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 IER5Q5VY09 327 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 LARP1BQ659C4 914 aaKnown RBP20.37■□□□□ 0.85
CLDND1-220ENST00000508902 FAM228AQ86W67 206 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 NME8Q8N427 588 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 ERVK-5Q9HDB9 667 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 CYP26B1Q9NR63 512 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 PADI3Q9ULW8 664 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 KIF3AQ9Y496 699 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 PCDHA11Q9Y5I1 949 aa20.37■□□□□ 0.85
CLDND1-220ENST00000508902 MYH15Q9Y2K3 1946 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 TMEM265A0A087WTH1 108 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 EPOPA6NHQ4 379 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 MAFO75444 373 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-220ENST00000508902 LYPLA2O95372 231 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 GJB5O95377 273 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 YWHABP31946 246 aaKnown RBP20.36■□□□□ 0.85
CLDND1-220ENST00000508902 TECP42680 631 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 KCNJ6P48051 423 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 TBC1D8BQ0IIM8 1120 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 PTGDRQ13258 359 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 FAM117BQ6P1L5 589 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 ZNF576Q9H609 170 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 DHX33Q9H6R0 707 aaKnown RBP20.36■□□□□ 0.85
CLDND1-220ENST00000508902 SUGCTQ9HAC7 445 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 XPNPEP1Q9NQW7 623 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 BMP2KQ9NSY1 1161 aaPredicted RBP20.36■□□□□ 0.85
CLDND1-220ENST00000508902 GINS2Q9Y248 185 aa20.36■□□□□ 0.85
CLDND1-220ENST00000508902 SPTBN5Q9NRC6 3674 aaKnown RBP20.36■□□□□ 0.85
CLDND1-220ENST00000508902 KIAA1671Q9BY89 1806 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 GPC3P51654 580 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 RAB30Q15771 203 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 CATSPER3Q86XQ3 398 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 TPH2Q8IWU9 490 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 MYOCDQ8IZQ8 938 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 CRIPAKQ8N1N5 446 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 INTS4Q96HW7 963 aaKnown RBP20.35■□□□□ 0.85
CLDND1-220ENST00000508902 CDX2Q99626 313 aaPredicted RBP20.35■□□□□ 0.85
CLDND1-220ENST00000508902 ZSWIM4Q9H7M6 989 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 NOL7Q9UMY1 257 aaKnown RBP20.35■□□□□ 0.85
CLDND1-220ENST00000508902 AKT3Q9Y243 479 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 SQORQ9Y6N5 450 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 NLRC5Q86WI3 1866 aa20.35■□□□□ 0.85
CLDND1-220ENST00000508902 PP2D1A8MPX8 630 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 H3BQV1 296 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 ENPP3O14638 875 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 RPLP2P05387 115 aaKnown RBP20.34■□□□□ 0.85
CLDND1-220ENST00000508902 FXR2P51116 673 aaKnown RBP eCLIP20.34■□□□□ 0.85
CLDND1-220ENST00000508902 NLRP11P59045 1033 aaKnown RBP20.34■□□□□ 0.85
CLDND1-220ENST00000508902 RESTQ13127 1097 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 FERMT3Q86UX7 667 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 KSR1Q8IVT5 923 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 MYLIPQ8WY64 445 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 APBB2Q92870 758 aa20.34■□□□□ 0.85
CLDND1-220ENST00000508902 RC3H2Q9HBD1 1191 aaKnown RBP20.34■□□□□ 0.85
CLDND1-220ENST00000508902 EFCAB14O75071 495 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 CSDE1O75534 798 aaKnown RBP20.33■□□□□ 0.85
CLDND1-220ENST00000508902 SYT1P21579 422 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 FGFR4P22455 802 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 CRYBB1P53674 252 aaPredicted RBP20.33■□□□□ 0.85
CLDND1-220ENST00000508902 HTRA4P83105 476 aaPredicted RBP20.33■□□□□ 0.85
CLDND1-220ENST00000508902 TAP1Q03518 808 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 POTEGQ6S5H5 508 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 IGSF22Q8N9C0 903 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 PIGOQ8TEQ8 1089 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 TOP1MTQ969P6 601 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 CEP170P1Q96L14 293 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 MMTAG2Q9BU76 263 aaKnown RBP20.33■□□□□ 0.85
CLDND1-220ENST00000508902 MSRAQ9UJ68 235 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 MTMR6Q9Y217 621 aa20.33■□□□□ 0.85
CLDND1-220ENST00000508902 ATG2AQ2TAZ0 1938 aa20.33■□□□□ 0.84
CLDND1-220ENST00000508902 LINC00271P0C7V0 271 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 RARRES1P49788 294 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 ATP2C1P98194 919 aaPredicted RBP20.32■□□□□ 0.84
CLDND1-220ENST00000508902 ADGRE1Q14246 886 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 DSC3Q14574 896 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 RILPL1Q5EBL4 403 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 FAM173BQ6P4H8 233 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 NEK9Q8TD19 979 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 TMEM143Q96AN5 459 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 POLR3CQ9BUI4 534 aaPredicted RBP20.32■□□□□ 0.84
CLDND1-220ENST00000508902 ST3GAL5Q9UNP4 418 aa20.32■□□□□ 0.84
CLDND1-220ENST00000508902 FNDC1Q4ZHG4 1894 aaPredicted RBP20.32■□□□□ 0.84
CLDND1-220ENST00000508902 UNC80Q8N2C7 3258 aa20.31■□□□□ 0.84
CLDND1-220ENST00000508902 VPS37CA5D8V6 355 aaPredicted RBP20.31■□□□□ 0.84
CLDND1-220ENST00000508902 M0QZ92 97 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms