RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 PI4K2BG5E9Z4 385 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 EFCAB14O75071 495 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 EIF3JO75822 258 aaKnown RBP10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 HOXD8P13378 290 aaPredicted RBP10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 HAND2P61296 217 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 DEFB103AP81534 67 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 DGKDQ16760 1214 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 TCTN1Q2MV58 587 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 TRIM71Q2Q1W2 868 aaKnown RBP10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 USH1GQ495M9 461 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 TMEM31Q5JXX7 168 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 SEPT14Q6ZU15 432 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 LRRC8DQ7L1W4 858 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 MCF2L2Q86YR7 1114 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 GALNT6Q8NCL4 622 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 STK32AQ8WU08 396 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 RMDN3Q96TC7 470 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 CPVLQ9H3G5 476 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 RNF41Q9H4P4 317 aaPredicted RBP10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 C11orf16Q9NQ32 467 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 HDAC6Q9UBN7 1215 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 DNMT3AQ9Y6K1 912 aaPredicted RBP10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 WDFY4Q6ZS81 3184 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 C5orf42Q9H799 3197 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 SIP14410 1827 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 TRIOO75962 3097 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 ABCB11O95342 1321 aa10.04□□□□□ -0.8
COL4A3BP-206ENST00000508809 COL4A4P53420 1690 aaPredicted RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 C2CD2LO14523 706 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 F2P00734 622 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 GOLGA8HP0CJ92 632 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 AMPD1P23109 780 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 GHRHRQ02643 423 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 CDC37Q16543 378 aaPredicted RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 CCDC178Q5BJE1 867 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 IER5Q5VY09 327 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 TMCO2Q7Z6W1 182 aaPredicted RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 TBC1D10CQ8IV04 446 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 ADGRF4Q8IZF3 695 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 PPTC7Q8NI37 304 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 EDARADDQ8WWZ3 215 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 ESR2Q92731 530 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 TGS1Q96RS0 853 aaKnown RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 KATNAL1Q9BW62 490 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 CD320Q9NPF0 282 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 BAZ2BQ9UIF8 2168 aaKnown RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 MRPL11Q9Y3B7 192 aaKnown RBP10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 CCDC171Q6TFL3 1326 aa10.03□□□□□ -0.8
COL4A3BP-206ENST00000508809 LINC01553A4QN01 128 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 TGFBR3LH3BV60 316 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 PRMT3O60678 531 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 PPFIA4O75335 1185 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 EPB42P16452 691 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 CHMP4BP1P59074 171 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 HDAC1Q13547 482 aaPredicted RBP10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 IKBKEQ14164 716 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 MBTPS1Q14703 1052 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 QRICH1Q2TAL8 776 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 ASPRV1Q53RT3 343 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZNF468Q5VIY5 522 aaPredicted RBP10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 CHST3Q7LGC8 479 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 IQCA1Q86XH1 822 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 C7orf31Q8N865 590 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 GDPD5Q8WTR4 605 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 WNT8BQ93098 351 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 PXMP2Q9NR77 195 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 MAP3K20Q9NYL2 800 aaKnown RBP10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 INSL6Q9Y581 213 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 KAT6AQ92794 2004 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 NEDD4P46934 1319 aa10.02□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZNF213O14771 459 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 OPLAHO14841 1288 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 TGFB3P10600 412 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 HSD17B4P51659 736 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 HTRA4P83105 476 aaPredicted RBP10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZNF200P98182 395 aaPredicted RBP10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 TYRO3Q06418 890 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 KIAA0753Q2KHM9 967 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 LEXMQ3ZCV2 418 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZNF618Q5T7W0 954 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 TMEM164Q5U3C3 297 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 ARHGEF16Q5VV41 709 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 KCNV1Q6PIU1 500 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 STOX1Q6ZVD7 989 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 BTLAQ7Z6A9 289 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 VSIG10LQ86VR7 867 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 FBXO11Q86XK2 927 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 FAM178BQ8IXR5 827 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 SAMD3Q8N6K7 520 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 BEND7Q8N7W2 519 aaPredicted RBP10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 MTMR8Q96EF0 704 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 PRIMPOLQ96LW4 560 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZKSCAN3Q9BRR0 538 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 UBE2ZQ9H832 354 aaPredicted RBP10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 JMJD4Q9H9V9 463 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 ZSWIM5Q9P217 1185 aa10.01□□□□□ -0.81
COL4A3BP-206ENST00000508809 PIK3R2O00459 728 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms