RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 ZNF174Q15697 407 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 ESRP1Q6NXG1 681 aaKnown RBP7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 DBX2Q6ZNG2 339 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 FILIP1Q7Z7B0 1213 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 KIAA0907Q7Z7F0 614 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 NIM1KQ8IY84 436 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 Q8TCH9 128 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 E2F7Q96AV8 911 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 ELF4Q99607 663 aaPredicted RBP7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 FEZ1Q99689 392 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 OXSMQ9NWU1 459 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 OAZ3Q9UMX2 235 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 NR2E1Q9Y466 385 aa7.75□□□□□ -1.17
TOPBP1-206ENST00000508524 UBA6A0AVT1 1052 aaPredicted RBP7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 C1QTNF3-AMACRE9PGA6 284 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 F2P00734 622 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 ROM1Q03395 351 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 DUSP8Q13202 625 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 EPHA7Q15375 998 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 DALRD3Q5D0E6 543 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 USP30Q70CQ3 517 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 TAX1BP1Q86VP1 789 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 KIF18BQ86Y91 864 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 DHX37Q8IY37 1157 aaKnown RBP7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 BORCS6Q96GS4 357 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 MAML3Q96JK9 1138 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 GPR20Q99678 358 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 DPYSL5Q9BPU6 564 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 OR10A2Q9H208 303 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 H2AFY2Q9P0M6 372 aaPredicted RBP7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 SPO11Q9Y5K1 396 aa7.74□□□□□ -1.17
TOPBP1-206ENST00000508524 ZNF891A8MT65 544 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 ZNF623O75123 536 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 INSRRP14616 1297 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 NEK4P51957 841 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 DSG1Q02413 1049 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 MAP3K12Q12852 859 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 ZXDCQ2QGD7 858 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 SLFN12LQ6IEE8 588 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 RTKN2Q8IZC4 609 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 GIMAP8Q8ND71 665 aaPredicted RBP7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 KLC2Q9H0B6 622 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 JAG2Q9Y219 1238 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 PLAAQ9Y263 795 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 MYRFQ9Y2G1 1151 aa7.73□□□□□ -1.17
TOPBP1-206ENST00000508524 ENPP3O14638 875 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 CR2P20023 1033 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 MEOX1P50221 254 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 HGFACQ04756 655 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 R3HDM1Q15032 1099 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 TTC38Q5R3I4 469 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 ZNF585AQ6P3V2 769 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 CNNM4Q6P4Q7 775 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 NXPE1Q8N323 547 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 TARS2Q9BW92 718 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 ZFR2Q9UPR6 939 aaKnown RBP7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 ZKSCAN5Q9Y2L8 839 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 TBX22Q9Y458 520 aa7.72□□□□□ -1.17
TOPBP1-206ENST00000508524 SELENOPP49908 381 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 MYBPC3Q14896 1274 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 PCBP1Q15365 356 aaKnown RBP eCLIP7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 NOP9Q86U38 636 aaKnown RBP7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 NME9Q86XW9 330 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 FUKQ8N0W3 1084 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 OR5AN1Q8NGI8 311 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 MFSD3Q96ES6 412 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 DEF6Q9H4E7 631 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 ZMAT4Q9H898 229 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 TSC22D4Q9Y3Q8 395 aa7.71□□□□□ -1.18
TOPBP1-206ENST00000508524 CDC14BO60729 498 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 GAS7O60861 476 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 ANTXR2P58335 489 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 SEPT7Q16181 437 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 PRAMEF9Q5VWM5 478 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 EFHBQ8N7U6 833 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 OR14K1Q8NGZ2 314 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 CHTF18Q8WVB6 975 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 TUBGCP5Q96RT8 1024 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 PLA2G12BQ9BX93 195 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 TOMM22Q9NS69 142 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 USP35Q9P2H5 1018 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 PUF60Q9UHX1 559 aaKnown RBP7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 MAGEL2Q9UJ55 1249 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 VWA7Q9Y334 891 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 TCAF1Q9Y4C2 921 aa7.7□□□□□ -1.18
TOPBP1-206ENST00000508524 RAD17O75943 681 aa7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 PUM1Q14671 1186 aaKnown RBP eCLIP7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 PPM1KQ8N3J5 372 aa7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 MSL2Q9HCI7 577 aa7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 THG1LQ9NWX6 298 aaKnown RBP7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 KCMF1Q9P0J7 381 aa7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 FAM184BQ9ULE4 1060 aa7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 CTDP1Q9Y5B0 961 aaPredicted RBP7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 SLC30A1Q9Y6M5 507 aa7.69□□□□□ -1.18
TOPBP1-206ENST00000508524 TNFRSF1AP19438 455 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 ADCY1Q08828 1119 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 ADAM15Q13444 863 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 DGKDQ16760 1214 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 KANSL1Q7Z3B3 1105 aa7.68□□□□□ -1.18
TOPBP1-206ENST00000508524 PALM2Q8IXS6 379 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms