RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 PMFBP1Q8TBY8 1022 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 MKL1Q969V6 931 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 BBC3Q96PG8 261 aaPredicted RBP4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 SPATA9Q9BWV2 254 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 ZDHHC5Q9C0B5 715 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 PIF1Q9H611 641 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 RIOX1Q9H6W3 641 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 GALNT8Q9NY28 637 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 CDC42EP3Q9UKI2 254 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 FAM184BQ9ULE4 1060 aa4.02□□□□□ -1.77
TOPBP1-205ENST00000506779 MATN2O00339 956 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 GSTA4O15217 222 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 LMNAP02545 664 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 APPP05067 770 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 SRGAP2CP0DJJ0 459 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 PDE6AP16499 860 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 AOAHP28039 575 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 CD38P28907 300 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 HIBADHP31937 336 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 SUMO1P63165 101 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 NFYCQ13952 458 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 MAMDC4Q6UXC1 1216 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 LRP10Q7Z4F1 713 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 RPUSD2Q8IZ73 545 aaKnown RBP4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 PTPRN2Q92932 1015 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 ZNF669Q96BR6 464 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 CCDC113Q9H0I3 377 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 MSL2Q9HCI7 577 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 TLR9Q9NR96 1032 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 PPP1R1BQ9UD71 204 aaPredicted RBP4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 PCDHA8Q9Y5H6 950 aa4.01□□□□□ -1.77
TOPBP1-205ENST00000506779 TRBV23-1A0A0A0MS06 115 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 A0A0G2JNJ9 132 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 CAPN14A8MX76 684 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 KCNK3O14649 394 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 PDPK1O15530 556 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 ADCY3O60266 1144 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 MRE11P49959 708 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 DNM2P50570 870 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 FOXL1Q12952 345 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 MAPK7Q13164 816 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 PCOLCEQ15113 449 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 TBR1Q16650 682 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 CCDC144BQ3MJ40 725 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 SOGA3Q5TF21 947 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 LARP4Q71RC2 724 aaKnown RBP eCLIP4□□□□□ -1.77
TOPBP1-205ENST00000506779 SPATC1Q76KD6 591 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 SGMS1Q86VZ5 419 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 OSTM1Q86WC4 334 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 ZC3H7AQ8IWR0 971 aaKnown RBP4□□□□□ -1.77
TOPBP1-205ENST00000506779 OR14K1Q8NGZ2 314 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 TMEM176AQ96HP8 235 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 BTBD2Q9BX70 525 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 OR10A2Q9H208 303 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 ZNF703Q9H7S9 590 aaPredicted RBP4□□□□□ -1.77
TOPBP1-205ENST00000506779 UCKL1Q9NWZ5 548 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 PLA2G3Q9NZ20 509 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 USP35Q9P2H5 1018 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 Q9UFV3 132 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 CBLCQ9ULV8 474 aa4□□□□□ -1.77
TOPBP1-205ENST00000506779 CCDC66A2RUB6 948 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CCDC85CA6NKD9 419 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 WNT9AO14904 365 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 DIAPH1O60610 1272 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CLASP2O75122 1294 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 C4BPAP04003 597 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 AMY2AP04746 511 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 AMY2BP19961 511 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 ECE1P42892 770 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 JAM2P57087 298 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 HERVK_113P62684 666 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CD83Q01151 205 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 SSRP1Q08945 709 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 DUSP8Q13202 625 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CRHR2Q13324 411 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 BMS1Q14692 1282 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 EIF4HQ15056 248 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 MTERF2Q49AM1 385 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 LRSAM1Q6UWE0 723 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 C16orf59Q7L2K0 433 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 D2HGDHQ8N465 521 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CISD2Q8N5K1 135 aaKnown RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 JMYQ8N9B5 988 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 C9orf106Q8NAJ2 232 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 HIPK4Q8NE63 616 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 PCDH19Q8TAB3 1148 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CFHR4Q92496 578 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 WASF1Q92558 559 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 WNK4Q96J92 1243 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 OR10A5Q9H207 317 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 NELFAQ9H3P2 528 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 AURKAIP1Q9NWT8 199 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 BTBD7Q9P203 1132 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 ZNHIT2Q9UHR6 403 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 PFDN2Q9UHV9 154 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 CDK11AQ9UQ88 783 aaPredicted RBP3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 GIT1Q9Y2X7 761 aa3.99□□□□□ -1.77
TOPBP1-205ENST00000506779 ZNF561-AS1K7EIQ3 104 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 ARVCFO00192 962 aa3.98□□□□□ -1.77
TOPBP1-205ENST00000506779 SCDO00767 359 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms