RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 CLCN3P51790 818 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 PAK2Q13177 524 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 TARBP2Q15633 366 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 LETM2Q2VYF4 491 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 C8orf34Q49A92 452 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 EPC2Q52LR7 807 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 EARS2Q5JPH6 523 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 MIER3Q7Z3K6 550 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 NEK8Q86SG6 692 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 MICALL1Q8N3F8 863 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 WASF1Q92558 559 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 CLP1Q92989 425 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 ASB2Q96Q27 587 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 NRBP2Q9NSY0 501 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 VAV3Q9UKW4 847 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 NOC2LQ9Y3T9 749 aaKnown RBP10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 ADGRA3Q8IWK6 1321 aa10.23□□□□□ -0.77
PDLIM5-209ENST00000506632 FAM205CA6NFA0 338 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 C5orf67F2Z3F1 127 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 H3BNC9 293 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 TBX3O15119 743 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 MGEA5O60502 916 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 JAK2O60674 1132 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 RPS6KA5O75582 802 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 VTNP04004 478 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 CRYBB1P53674 252 aaPredicted RBP10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 MRPS5P82675 430 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 NR5A1Q13285 461 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 PPP2R5CQ13362 524 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 KIZQ2M2Z5 673 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 TMEM266Q2M3C6 531 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 EFCAB12Q6NXP0 572 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 PIK3AP1Q6ZUJ8 805 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 TRMT1LQ7Z2T5 733 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 NPAS4Q8IUM7 802 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 TMEM192Q8IY95 271 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 FIBCD1Q8N539 461 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 SYMPKQ92797 1274 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 HAS1Q92839 578 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 FAM20AQ96MK3 541 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 KIF2CQ99661 725 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 NIFKQ9BYG3 293 aaKnown RBP10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 ADAMTS10Q9H324 1103 aa10.22□□□□□ -0.77
PDLIM5-209ENST00000506632 VCANP13611 3396 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 IGKV6-21A0A0C4DH24 114 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 C9IYK1 514 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 EML1O00423 815 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 MMP1P03956 469 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 RB1P06400 928 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 KRT2P35908 639 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 BMPR1AP36894 532 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 SARSP49591 514 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 TFF2Q03403 129 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 SPIRE1Q08AE8 756 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 DSC3Q14574 896 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 XKR3Q5GH77 459 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 ODR4Q5SWX8 454 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 FAM228AQ86W67 206 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 HOMEZQ8IX15 550 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 CMTR2Q8IYT2 770 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 ZNF710Q8N1W2 664 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 LRRC71Q8N4P6 559 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 METTL13Q8N6R0 699 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 MRPL38Q96DV4 380 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 MAP7D2Q96T17 732 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 OSMRQ99650 979 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 NAP1L4Q99733 375 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 RYDENQ9NUL5 291 aaKnown RBP10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 ST3GAL5Q9UNP4 418 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 COG5Q9UP83 839 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 GINS2Q9Y248 185 aa10.21□□□□□ -0.77
PDLIM5-209ENST00000506632 MYO7AQ13402 2215 aa10.21□□□□□ -0.78
PDLIM5-209ENST00000506632 BDP1A6H8Y1 2624 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 TMEM150BA6NC51 233 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 GPR182O15218 404 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 CCNT1O60563 726 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 STAG3L1P0CL83 205 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 BMP1P13497 986 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 TMOD1P28289 359 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 GPC3P51654 580 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 NLRP11P59045 1033 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 PSMC5P62195 406 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 TBC1D8BQ0IIM8 1120 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 NFX1Q12986 1120 aaKnown RBP10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 DRP2Q13474 957 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 GPM6BQ13491 265 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 BTG3Q14201 252 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 ATG2AQ2TAZ0 1938 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 ANO5Q75V66 913 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 PPP1R16BQ96T49 567 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 ADAM2Q99965 735 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 KIAA1671Q9BY89 1806 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 RGS18Q9NS28 235 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 C1orf112Q9NSG2 853 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 WRAP73Q9P2S5 460 aaPredicted RBP10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 LIMCH1Q9UPQ0 1083 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 AKT3Q9Y243 479 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 RWDD3Q9Y3V2 267 aa10.2□□□□□ -0.78
PDLIM5-209ENST00000506632 REV3LO60673 3130 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms