RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 NLRP12P59046 1061 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 SQLEQ14534 574 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC129Q6ZRS4 1044 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 SCYL3Q8IZE3 742 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PGBD1Q96JS3 809 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 TRIM62Q9BVG3 475 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 IL1RAPL2Q9NP60 686 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 AGPAT3Q9NRZ7 376 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 BMP2KQ9NSY1 1161 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PIK3R4Q99570 1358 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 TSPAN4O14817 238 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 MAP3K13O43283 966 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 STARD3NLO95772 234 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 CCR3P51677 355 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 FAM180BQ6P0A1 224 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PLA2G4DQ86XP0 818 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 GPT2Q8TD30 523 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 S100PBPQ96BU1 408 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 ART5Q96L15 291 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 CEP19Q96LK0 163 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 OSBPL3Q9H4L5 887 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PREBQ9HCU5 417 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 A1CFQ9NQ94 594 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PTBP2Q9UKA9 531 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 GPC6Q9Y625 555 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 ITIH6Q6UXX5 1313 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 TP73O15350 636 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 GSTO1P78417 241 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 SMAD4Q13485 552 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 DCAF17Q5H9S7 520 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 ARMC4Q5T2S8 1044 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 C6orf118Q5T5N4 469 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PPM1NQ8N819 430 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 URGCPQ8TCY9 931 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 EXT2Q93063 718 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 AIPL1Q9NZN9 384 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 TROQ12816 1431 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 SYNJ2BP-COX16A0A087WUM0 186 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 YKT6O15498 198 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 SLC9A1P19634 815 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 TAGLNQ01995 201 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 LRRC8BQ6P9F7 803 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 RASSF3Q86WH2 238 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 FBXO30Q8TB52 745 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 SPATA18Q8TC71 538 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 HEXDCQ8WVB3 486 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 MAML1Q92585 1016 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 MCRS1Q96EZ8 462 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 FERMT1Q9BQL6 677 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 HERPUD2Q9BSE4 406 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 USP47Q96K76 1375 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 MCF2P10911 925 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PRKAR1BP31321 381 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 MAPK8P45983 427 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 ALDH18A1P54886 795 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 KDSRQ06136 332 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 RAPSNQ13702 412 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 Q3ZCU0 254 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 WDR44Q5JSH3 913 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PNPT1Q8TCS8 783 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 CCDC127Q96BQ5 260 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 RADILQ96JH8 1075 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 PPP1R36Q96LQ0 422 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 HNRNPABQ99729 332 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 NT5C3AQ9H0P0 336 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 NOL6Q9H6R4 1146 aaKnown RBP6.68□□□□□ -1.34
CLCN3-204ENST00000504131 KRT84Q9NSB2 600 aa6.68□□□□□ -1.34
CLCN3-204ENST00000504131 EFCAB8A8MWE9 144 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 NUDT19A8MXV4 375 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CPP00450 1065 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PDGFRBP09619 1106 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ATP2A2P16615 1042 aaKnown RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 KCNA3P22001 575 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 THOP1P52888 689 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 OXCT1P55809 520 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 STK4Q13043 487 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 LRRC41Q15345 812 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 CLVS2Q5SYC1 327 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ALG1LQ6GMV1 187 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 SH3TC2Q8TF17 1288 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ARL5BQ96KC2 179 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ZKSCAN3Q9BRR0 538 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 BRD7Q9NPI1 651 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 TCF7L2Q9NQB0 619 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ZNF446Q9NWS9 450 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 NPIPA7E9PJI5 369 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 RASGRF2O14827 1237 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 STRNO43815 780 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 KPNA6O60684 536 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 NPIPA8P0DM63 369 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 KPNA1P52294 538 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ITKQ08881 620 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 DRP2Q13474 957 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ADCK1Q86TW2 530 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 ZFYVE19Q96K21 471 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 MLPHQ9BV36 600 aaPredicted RBP6.67□□□□□ -1.34
CLCN3-204ENST00000504131 EPS15L1Q9UBC2 864 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 DNAJB4Q9UDY4 337 aa6.67□□□□□ -1.34
CLCN3-204ENST00000504131 PARP2Q9UGN5 583 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms