RNA–Protein interactions for RNA: ENST00000498837.1

SEC61A1-207, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 2

Gene SEC61A1, Length 555 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-207ENST00000498837 SGMS1Q86VZ5 419 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 YTHDC1Q96MU7 727 aaKnown RBP16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 ATP6V0A4Q9HBG4 840 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 ZNF302Q9NR11 478 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 RNF216Q9NWF9 866 aaPredicted RBP16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 TMEM161AQ9NX61 479 aa16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 RIF1Q5UIP0 2472 aaKnown RBP16.68■□□□□ 0.26
SEC61A1-207ENST00000498837 SMCO2A6NFE2 343 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 HIDE1A8MVS5 230 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 C22orf31O95567 290 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 VTNP04004 478 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 LAG3P18627 525 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 AVPR2P30518 371 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 SREBF1P36956 1147 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 CRYBB1P53674 252 aaPredicted RBP16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 FUT2Q10981 343 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 DSC3Q14574 896 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 NECTIN1Q15223 517 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 PTPN21Q16825 1174 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 ODR4Q5SWX8 454 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 TRMT1LQ7Z2T5 733 aaKnown RBP16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 MRPS27Q92552 414 aaKnown RBP16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 RNF19AQ9NV58 838 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 CDH22Q9UJ99 828 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 LZTS1Q9Y250 596 aa16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 V9GY48 417 aaPredicted RBP16.67■□□□□ 0.26
SEC61A1-207ENST00000498837 FSD2A1L4K1 749 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM86B1E9PN63 330 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 ST18O60284 1047 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 GPR32O75388 356 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 PDGFBP01127 241 aaPredicted RBP16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM86B2P0C5J1 330 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 PBX3P40426 434 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 CLK2P49760 499 aaKnown RBP16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 PPP1R18Q6NYC8 613 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM43BQ6ZT52 329 aaPredicted RBP16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 PLA2G4DQ86XP0 818 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 RASGRP4Q8TDF6 673 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 CASD1Q96PB1 797 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 TCF25Q9BQ70 676 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 ELAC1Q9H777 363 aaKnown RBP16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 ENTPD7Q9NQZ7 604 aa16.66■□□□□ 0.26
SEC61A1-207ENST00000498837 FAM186AA6NE01 2351 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 IGLV3-22A0A075B6J6 115 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 JAKMIP3Q5VZ66 844 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 MIS18BP1Q6P0N0 1132 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 KCNT2Q6UVM3 1135 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 SYNE3Q6ZMZ3 975 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 NIPA1Q7RTP0 329 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 CKAP2LQ8IYA6 745 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 METTL13Q8N6R0 699 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 SNX27Q96L92 541 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 TCEANC2Q96MN5 208 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 TMEM117Q9H0C3 514 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 RBM28Q9NW13 759 aaKnown RBP16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 PUF60Q9UHX1 559 aaKnown RBP16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 BRPF3Q9ULD4 1205 aa16.65■□□□□ 0.26
SEC61A1-207ENST00000498837 IPO5O00410 1097 aaKnown RBP16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 ADAMTS3O15072 1205 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 SRGAP2BP0DMP2 458 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 CLCN3P51790 818 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 AP3B2Q13367 1082 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 TMC7Q7Z402 723 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 ZBTB33Q86T24 672 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 BBXQ8WY36 941 aaPredicted RBP16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 RIPOR3Q96MK2 946 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 ESYT1Q9BSJ8 1104 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 BARHL2Q9NY43 387 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 MAFBQ9Y5Q3 323 aaPredicted RBP16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 C2orf16Q68DN1 1984 aa16.64■□□□□ 0.25
SEC61A1-207ENST00000498837 MYO15AQ9UKN7 3530 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 GFRA3O60609 400 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 NLRP11P59045 1033 aaKnown RBP16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 RTN1Q16799 776 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 CRYGNQ8WXF5 182 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 ATOH1Q92858 354 aaPredicted RBP16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF668Q96K58 619 aaPredicted RBP16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF577Q9BSK1 485 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 NGRNQ9NPE2 291 aaKnown RBP16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 TSHZ2Q9NRE2 1034 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 FAM217BQ9NTX9 383 aaPredicted RBP16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 DENND4AQ7Z401 1863 aa16.63■□□□□ 0.25
SEC61A1-207ENST00000498837 VPS13AQ96RL7 3174 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 H0Y858 1186 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 hCG_1984214I3L0E3 225 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 ZBTB43O43298 467 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 CYP3A4P08684 503 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 HOXB8P17481 243 aaPredicted RBP16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 CDC27P30260 824 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 EXOSC10Q01780 885 aaKnown RBP16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 EFCAB12Q6NXP0 572 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 ECHDC2Q86YB7 292 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 ZNF713Q8N859 430 aaPredicted RBP16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 KREMEN2Q8NCW0 462 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 ADAMTS10Q9H324 1103 aa16.62■□□□□ 0.25
SEC61A1-207ENST00000498837 POMKQ9H5K3 350 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms