RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 SPIRE1Q08AE8 756 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 SNW1Q13573 536 aaKnown RBP18.03■□□□□ 0.48
LMNA-217ENST00000498722 CTTNQ14247 550 aaKnown RBP18.03■□□□□ 0.48
LMNA-217ENST00000498722 EPHA7Q15375 998 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 MTERF2Q49AM1 385 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 TMEM240Q5SV17 173 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 RESP18Q5W5W9 173 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 RBM43Q6ZSC3 357 aaKnown RBP18.03■□□□□ 0.48
LMNA-217ENST00000498722 C16orf59Q7L2K0 433 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 OTOP2Q7RTS6 562 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 TPH2Q8IWU9 490 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 FMR1NBQ8N0W7 255 aaPredicted RBP18.03■□□□□ 0.48
LMNA-217ENST00000498722 DYDC2Q96IM9 177 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 LXNQ9BS40 222 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 RGL1Q9NZL6 768 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 FBXO2Q9UK22 296 aaPredicted RBP18.03■□□□□ 0.48
LMNA-217ENST00000498722 PCDHA2Q9Y5H9 948 aa18.03■□□□□ 0.48
LMNA-217ENST00000498722 TMEM150BA6NC51 233 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 CAND2O75155 1236 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 PARNO95453 639 aaKnown RBP18.02■□□□□ 0.48
LMNA-217ENST00000498722 CCDC192P0DO97 292 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 ACTN1P12814 892 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 PFKFB1P16118 471 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 TMEM62Q0P6H9 643 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 PTGDRQ13258 359 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 XKR3Q5GH77 459 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 TIGD1Q96MW7 591 aa18.02■□□□□ 0.48
LMNA-217ENST00000498722 EIF2AK1Q9BQI3 630 aaKnown RBP18.02■□□□□ 0.48
LMNA-217ENST00000498722 MTIF3Q9H2K0 278 aaKnown RBP18.02■□□□□ 0.48
LMNA-217ENST00000498722 PTPRSQ13332 1948 aa18.02■□□□□ 0.47
LMNA-217ENST00000498722 ZBTB42B2RXF5 422 aa18.01■□□□□ 0.47
LMNA-217ENST00000498722 NDUFA8P51970 172 aa18.01■□□□□ 0.47
LMNA-217ENST00000498722 ATP2C1P98194 919 aaPredicted RBP18.01■□□□□ 0.47
LMNA-217ENST00000498722 TBC1D8BQ0IIM8 1120 aa18.01■□□□□ 0.47
LMNA-217ENST00000498722 ARL6IP4Q66PJ3 421 aaKnown RBP18.01■□□□□ 0.47
LMNA-217ENST00000498722 SH2D3AQ9BRG2 576 aa18.01■□□□□ 0.47
LMNA-217ENST00000498722 HPSEQ9Y251 543 aa18.01■□□□□ 0.47
LMNA-217ENST00000498722 SMIM35A0A1B0GVV1 85 aa18■□□□□ 0.47
LMNA-217ENST00000498722 LAD1O00515 517 aa18■□□□□ 0.47
LMNA-217ENST00000498722 NBNO60934 754 aa18■□□□□ 0.47
LMNA-217ENST00000498722 C22orf31O95567 290 aa18■□□□□ 0.47
LMNA-217ENST00000498722 RPLP2P05387 115 aaKnown RBP18■□□□□ 0.47
LMNA-217ENST00000498722 SYKP43405 635 aa18■□□□□ 0.47
LMNA-217ENST00000498722 MRPS6P82932 125 aaKnown RBP18■□□□□ 0.47
LMNA-217ENST00000498722 CAMK4Q16566 473 aa18■□□□□ 0.47
LMNA-217ENST00000498722 IER5Q5VY09 327 aa18■□□□□ 0.47
LMNA-217ENST00000498722 PLA2G4FQ68DD2 849 aa18■□□□□ 0.47
LMNA-217ENST00000498722 SHC4Q6S5L8 630 aa18■□□□□ 0.47
LMNA-217ENST00000498722 ERMNQ8TAM6 284 aa18■□□□□ 0.47
LMNA-217ENST00000498722 CCDC43Q96MW1 224 aaKnown RBP18■□□□□ 0.47
LMNA-217ENST00000498722 PPP1R16BQ96T49 567 aa18■□□□□ 0.47
LMNA-217ENST00000498722 ZSWIM4Q9H7M6 989 aa18■□□□□ 0.47
LMNA-217ENST00000498722 SUGCTQ9HAC7 445 aa18■□□□□ 0.47
LMNA-217ENST00000498722 GINS2Q9Y248 185 aa18■□□□□ 0.47
LMNA-217ENST00000498722 CDY2AQ9Y6F7 541 aa18■□□□□ 0.47
LMNA-217ENST00000498722 LAMA2P24043 3122 aaKnown RBP18■□□□□ 0.47
LMNA-217ENST00000498722 MAGEB2O15479 319 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 ZNF202O95125 648 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 TMOD1P28289 359 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 MBTPS1Q14703 1052 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 EFCAB12Q6NXP0 572 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 TRAF7Q6Q0C0 670 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 SASS6Q6UVJ0 657 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 LRRC71Q8N4P6 559 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 NEK9Q8TD19 979 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 FUCA2Q9BTY2 467 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 RAB34Q9BZG1 259 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 WRAP73Q9P2S5 460 aaPredicted RBP17.99■□□□□ 0.47
LMNA-217ENST00000498722 AKT3Q9Y243 479 aa17.99■□□□□ 0.47
LMNA-217ENST00000498722 RBAK-RBAKDNI3L0D1 243 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 CHRNA1P02708 482 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 YWHABP31946 246 aaKnown RBP17.98■□□□□ 0.47
LMNA-217ENST00000498722 CLCN3P51790 818 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 CNKSR3Q6P9H4 555 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 DTHD1Q6ZMT9 781 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 ANO5Q75V66 913 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 OTUD6AQ7L8S5 288 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 RPAINQ86UA6 219 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 C4orf19Q8IY42 314 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 ELOA2Q8IYF1 753 aaPredicted RBP17.98■□□□□ 0.47
LMNA-217ENST00000498722 C4orf32Q8N8J7 132 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 HERVK_113Q902F9 699 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 CEP170P1Q96L14 293 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 MAP7D2Q96T17 732 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 NIFKQ9BYG3 293 aaKnown RBP17.98■□□□□ 0.47
LMNA-217ENST00000498722 CXXC1Q9P0U4 656 aaPredicted RBP17.98■□□□□ 0.47
LMNA-217ENST00000498722 LRWD1Q9UFC0 647 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 MYH11P35749 1972 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 SLITRK3O94933 977 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 VTNP04004 478 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 GHRP10912 638 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 FXR2P51116 673 aaKnown RBP eCLIP17.98■□□□□ 0.473e-7■■□□□ 12.4
LMNA-217ENST00000498722 NPEPPSP55786 919 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 GPNMBQ14956 572 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 LRIT3Q3SXY7 679 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 XKR9Q5GH70 373 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 FAM26DQ5JW98 314 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 KIAA0319LQ8IZA0 1049 aa17.98■□□□□ 0.47
LMNA-217ENST00000498722 NME8Q8N427 588 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms