RNA–Protein interactions for RNA: ENST00000498708.1

SPTA1-209, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-209ENST00000498708 UBE3CQ15386 1083 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 PTGISQ16647 500 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ZSCAN25Q6NSZ9 544 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 NFRKBQ6P4R8 1299 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 KIAA1211Q6ZU35 1233 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 FCHSD1Q86WN1 690 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 SLC9A9Q8IVB4 645 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 PLEKHM2Q8IWE5 1019 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 MYOCDQ8IZQ8 938 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ZNF444Q8N0Y2 327 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 LRRC47Q8N1G4 583 aaKnown RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 SUV39H2Q9H5I1 410 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ZBTB40Q9NUA8 1239 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 ARPP21Q9UBL0 812 aaPredicted RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 KLF15Q9UIH9 416 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 DDX19BQ9UMR2 479 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 R4GN57 208 aa6.55□□□□□ -1.36
SPTA1-209ENST00000498708 FLNBO75369 2602 aaKnown RBP6.55□□□□□ -1.36
SPTA1-209ENST00000498708 LCTP09848 1927 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 ZBED9Q6R2W3 1325 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 GSG1L2A8MUP6 293 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 M0R2C6 588 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 EML1O00423 815 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 ATP2A1O14983 1001 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 BRD1O95696 1058 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 GLP2RO95838 553 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 LINC00271P0C7V0 271 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 CKBP12277 381 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 SP100P23497 879 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 DNAJB1P25685 340 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 TXLNAP40222 546 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 EPHA4P54764 986 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 PCBP4P57723 403 aaKnown RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 PTPN11Q06124 597 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 IKQ13123 557 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 ANGPT1Q15389 498 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 DUSP28Q4G0W2 176 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 C20orf194Q5TEA3 1177 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 GDF6Q6KF10 455 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 ADGRD2Q7Z7M1 963 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 DEPDC4Q8N2C3 294 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 KREMEN2Q8NCW0 462 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 CYP2W1Q8TAV3 490 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 CAGE1Q8TC20 777 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 ZDHHC1Q8WTX9 485 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 WNT8BQ93098 351 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 OSBP2Q969R2 916 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 STRBPQ96SI9 672 aaKnown RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 YME1L1Q96TA2 773 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 SEC62Q99442 399 aaKnown RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 HINFPQ9BQA5 517 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 LRRCC1Q9C099 1032 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 EPB41L4AQ9HCS5 686 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 HCN2Q9UL51 889 aa6.54□□□□□ -1.36
SPTA1-209ENST00000498708 BARX2Q9UMQ3 279 aaPredicted RBP6.54□□□□□ -1.36
SPTA1-209ENST00000498708 ELOA3CA0A087WX78 387 aaPredicted RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 SPDYE3A6NKU9 549 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 ELOA3DA6NLF2 546 aaPredicted RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 TMEM232C9JQI7 657 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 GPAA1O43292 621 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 EFCAB14O75071 495 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 AMHP03971 560 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 ADRB1P08588 477 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 CTNNB1P35222 781 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 CLCN5P51795 746 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 RBM10P98175 930 aaKnown RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 ELOA3BQ3SY89 546 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 KIAA0319Q5VV43 1072 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 SLFN13Q68D06 897 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 CWF19L1Q69YN2 538 aaKnown RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 LRRC69Q6ZNQ3 347 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 RBM23Q86U06 439 aaKnown RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 EFHBQ8N7U6 833 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 PRPF38AQ8NAV1 312 aaKnown RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 CHST13Q8NET6 341 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 DBF4BQ8NFT6 615 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 ELOA3Q8NG57 546 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 OR6J1Q8NGC5 347 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 TPCN2Q8NHX9 752 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 SUSD6Q92537 303 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 TOP1MTQ969P6 601 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 POM121Q96HA1 1249 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 OSBPL7Q9BZF2 842 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 WDR11Q9BZH6 1224 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 LMAN2LQ9H0V9 348 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 A1CFQ9NQ94 594 aaKnown RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 ECHDC1Q9NTX5 307 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 NYAP2Q9P242 653 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 RBM19Q9Y4C8 960 aaKnown RBP6.53□□□□□ -1.36
SPTA1-209ENST00000498708 LAMA5O15230 3695 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 NBEAQ8NFP9 2946 aa6.53□□□□□ -1.36
SPTA1-209ENST00000498708 FANCMQ8IYD8 2048 aa6.52□□□□□ -1.37
SPTA1-209ENST00000498708 PALM3A6NDB9 673 aaPredicted RBP6.52□□□□□ -1.37
SPTA1-209ENST00000498708 ASB14A6NK59 587 aa6.52□□□□□ -1.37
SPTA1-209ENST00000498708 C1QTNF9BB2RNN3 333 aa6.52□□□□□ -1.37
SPTA1-209ENST00000498708 C5orf67F2Z3F1 127 aa6.52□□□□□ -1.37
SPTA1-209ENST00000498708 RNF113AO15541 343 aaKnown RBP6.52□□□□□ -1.37
SPTA1-209ENST00000498708 SIN3BO75182 1162 aa6.52□□□□□ -1.37
SPTA1-209ENST00000498708 TSPY3P0CV98 308 aa6.52□□□□□ -1.37
SPTA1-209ENST00000498708 TSPY8P0CW00 308 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms