RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 MSX2P35548 267 aaPredicted RBP5.35□□□□□ -1.55
CBX3-208ENST00000497498 STAT5BP51692 787 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 TMEM132BQ14DG7 1078 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 RTN4RL1Q86UN2 441 aaPredicted RBP5.35□□□□□ -1.55
CBX3-208ENST00000497498 ZNF808Q8N4W9 903 aaPredicted RBP5.35□□□□□ -1.55
CBX3-208ENST00000497498 C2orf69Q8N8R5 385 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 IGSF22Q8N9C0 903 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 OR14K1Q8NGZ2 314 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 IL17DQ8TAD2 202 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 SLITRK6Q9H5Y7 841 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 VWA7Q9Y334 891 aa5.35□□□□□ -1.55
CBX3-208ENST00000497498 NARSO43776 548 aaKnown RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 HIP1RO75146 1068 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 MECP2P51608 486 aaKnown RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 IRF9Q00978 393 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 ALDH6A1Q02252 535 aaKnown RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 PTH1RQ03431 593 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 MAP3K12Q12852 859 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 GRM7Q14831 915 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 C2orf27AQ580R0 203 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 CC2D1AQ6P1N0 951 aaPredicted RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 ADGRE4PQ86SQ3 457 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 C1orf210Q8IVY1 113 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 FOXB1Q99853 325 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 MENTQ9BUN1 341 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 BOCQ9BWV1 1114 aa5.34□□□□□ -1.55
CBX3-208ENST00000497498 AGO3Q9H9G7 860 aaKnown RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 NCOA5Q9HCD5 579 aaKnown RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 CTDP1Q9Y5B0 961 aaPredicted RBP5.34□□□□□ -1.55
CBX3-208ENST00000497498 FNTBP49356 437 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 DGCR2P98153 550 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 LILRB2Q8N423 598 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 SHCBP1Q8NEM2 672 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 CACTINQ8WUQ7 758 aaKnown RBP5.33□□□□□ -1.56
CBX3-208ENST00000497498 LPPQ93052 612 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 ZNF703Q9H7S9 590 aaPredicted RBP5.33□□□□□ -1.56
CBX3-208ENST00000497498 TLR9Q9NR96 1032 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 AURKAIP1Q9NWT8 199 aaPredicted RBP5.33□□□□□ -1.56
CBX3-208ENST00000497498 FAM184BQ9ULE4 1060 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 PTCH2Q9Y6C5 1203 aa5.33□□□□□ -1.56
CBX3-208ENST00000497498 PLD2O14939 933 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 ZNF202O95125 648 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 C1SP09871 688 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 HIBADHP31937 336 aaKnown RBP5.32□□□□□ -1.56
CBX3-208ENST00000497498 ABHD18Q0P651 414 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 FHL2Q14192 279 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 ARHGAP44Q17R89 818 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 LSM12Q3MHD2 195 aaKnown RBP5.32□□□□□ -1.56
CBX3-208ENST00000497498 AMER2Q8N7J2 671 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 RABGGTAQ92696 567 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 CSRNP2Q9H175 543 aa5.32□□□□□ -1.56
CBX3-208ENST00000497498 KRTAP23-1A1A580 65 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 ADCY7P51828 1080 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 SESN2P58004 480 aaPredicted RBP5.31□□□□□ -1.56
CBX3-208ENST00000497498 HHEXQ03014 270 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 ADAM15Q13444 863 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 RIN1Q13671 783 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 SAFB2Q14151 953 aaKnown RBP eCLIP5.31□□□□□ -1.56
CBX3-208ENST00000497498 SPTY2D1Q68D10 685 aaPredicted RBP5.31□□□□□ -1.56
CBX3-208ENST00000497498 KLHDC10Q6PID8 442 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 D2HGDHQ8N465 521 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 ERCC4Q92889 916 aaPredicted RBP5.31□□□□□ -1.56
CBX3-208ENST00000497498 E2F7Q96AV8 911 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 PLEKHG4BQ96PX9 1271 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 MPHOSPH9Q99550 1183 aa5.31□□□□□ -1.56
CBX3-208ENST00000497498 HECAQ9UBI9 543 aaPredicted RBP5.31□□□□□ -1.56
CBX3-208ENST00000497498 B4E1Z4 1266 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 M0R2C6 588 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 DVL2O14641 736 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 RAPGEF3O95398 923 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 PRLP01236 227 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 MCM7P33993 719 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 TGFB2P61812 414 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 FNDC7Q5VTL7 733 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 ZCCHC8Q6NZY4 707 aaKnown RBP5.3□□□□□ -1.56
CBX3-208ENST00000497498 DDX53Q86TM3 631 aaKnown RBP5.3□□□□□ -1.56
CBX3-208ENST00000497498 SGMS1Q86VZ5 419 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 SAE1Q9UBE0 346 aaPredicted RBP5.3□□□□□ -1.56
CBX3-208ENST00000497498 GIT1Q9Y2X7 761 aa5.3□□□□□ -1.56
CBX3-208ENST00000497498 OVOL3O00110 214 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 H2AFYO75367 372 aaKnown RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 GLRX3O76003 335 aaKnown RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 RGS3P49796 1198 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 ATP2C1P98194 919 aaPredicted RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 SLC6A3Q01959 620 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 ROM1Q03395 351 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 SF3A1Q15459 793 aaKnown RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 FNDC3BQ53EP0 1204 aaKnown RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 KRTAP5-3Q6L8H2 238 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 TMPRSS6Q8IU80 811 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 THEMISQ8N1K5 641 aaPredicted RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 CHST14Q8NCH0 376 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 GFM2Q969S9 779 aaKnown RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 SLC7A6OSQ96CW6 309 aaPredicted RBP5.29□□□□□ -1.56
CBX3-208ENST00000497498 TMEM176AQ96HP8 235 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 MAML3Q96JK9 1138 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 CLUHP3Q96NS8 147 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 SLC6A15Q9H2J7 730 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 ACSS2Q9NR19 701 aa5.29□□□□□ -1.56
CBX3-208ENST00000497498 CEP72Q9P209 647 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms