RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 ZBTB39O15060 712 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 ASAP2O43150 1006 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 GTPBP6O43824 516 aaPredicted RBP21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 C22orf31O95567 290 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 MARK3P27448 753 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 MCM6Q14566 821 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 UBE2Q1Q7Z7E8 422 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 NME8Q8N427 588 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 LINC01465Q8N7H1 131 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 SPATA20Q8TB22 786 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 KIFAP3Q92845 792 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 SYAP1Q96A49 352 aaPredicted RBP21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 PLIN2Q99541 437 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 TRIM9Q9C026 710 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 ATP6V0A4Q9HBG4 840 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 HDAC6Q9UBN7 1215 aa21.94■■□□□ 1.1
SCAMP3-209ENST00000497470 FRMD3A2A2Y4 597 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 CAND2O75155 1236 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 TMOD1P28289 359 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 DNM2P50570 870 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 NPEPPSP55786 919 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 POU5F1BQ06416 359 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 KIAA0100Q14667 2235 aaKnown RBP21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 MARCH8Q5T0T0 291 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 IER5Q5VY09 327 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 MTHFD1LQ6UB35 978 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 ANKRD33Q7Z3H0 272 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 LMBR1Q8WVP7 490 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 DRC1Q96MC2 740 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 MTRQ99707 1265 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 SEL1LQ9UBV2 794 aa21.93■■□□□ 1.1
SCAMP3-209ENST00000497470 KLRC1P26715 233 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 ABCD1P33897 745 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 ZNF131P52739 623 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 POLGP54098 1239 aaPredicted RBP21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 MTERF2Q49AM1 385 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 ARSHQ5FYA8 562 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 NT5DC1Q5TFE4 455 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 NECAB2Q7Z6G3 386 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 GPBP1Q86WP2 473 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 SLC17A8Q8NDX2 589 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 DDX12PQ92771 950 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 CLSTN2Q9H4D0 955 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 TUBE1Q9UJT0 475 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 KAT6AQ92794 2004 aa21.92■■□□□ 1.1
SCAMP3-209ENST00000497470 RBL2Q08999 1139 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 GIT2Q14161 759 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 MXD4Q14582 209 aaPredicted RBP21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 EMC2Q15006 297 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 POSTNQ15063 836 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 PLA2G4FQ68DD2 849 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 SERINC5Q86VE9 423 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 VTI1AQ96AJ9 217 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 DNAJC19Q96DA6 116 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 GSDMAQ96QA5 445 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 NTPCRQ9BSD7 190 aaKnown RBP21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 C11orf49Q9H6J7 331 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 XPNPEP1Q9NQW7 623 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 SETD4Q9NVD3 440 aa21.91■■□□□ 1.1
SCAMP3-209ENST00000497470 ARID2Q68CP9 1835 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 PHLPP2Q6ZVD8 1323 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 MYMKA6NI61 221 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 MYCP01106 439 aaPredicted RBP21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 MYCNP04198 464 aaPredicted RBP21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 MAPTP10636 758 aaKnown RBP21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 GAP43P17677 238 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 ARL2P36404 184 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 PTK7Q13308 1070 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 KCNB1Q14721 858 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 COL13A1Q5TAT6 717 aaPredicted RBP21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 SLC39A5Q6ZMH5 540 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 RBM43Q6ZSC3 357 aaKnown RBP21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 RUSC1Q9BVN2 902 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 LARSQ9P2J5 1176 aaKnown RBP21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 COL4A3BPQ9Y5P4 624 aa21.9■■□□□ 1.1
SCAMP3-209ENST00000497470 LETM1O95202 739 aaPredicted RBP21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 SMC2O95347 1197 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 DPYDQ12882 1025 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 PSMD2Q13200 908 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 PPP2R5AQ15172 486 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 UNC13DQ70J99 1090 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 CCDC65Q8IXS2 484 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 SPIRE2Q8WWL2 714 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 ABHD8Q96I13 439 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 NUP62CLQ9H1M0 184 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 OLFML3Q9NRN5 406 aa21.89■■□□□ 1.09
SCAMP3-209ENST00000497470 TMEM150BA6NC51 233 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 USO1O60763 962 aaKnown RBP21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 CD4P01730 458 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 SSBP05455 408 aaKnown RBP eCLIP21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 SARSP49591 514 aaKnown RBP21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 EHHADHQ08426 723 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 MAPK7Q13164 816 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 CCDC183Q5T5S1 534 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 GDF6Q6KF10 455 aaPredicted RBP21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 EFCAB12Q6NXP0 572 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 RSPH3Q86UC2 560 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 TRIML1Q8N9V2 468 aa21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 PSPC1Q8WXF1 523 aaKnown RBP21.88■■□□□ 1.09
SCAMP3-209ENST00000497470 CCDC47Q96A33 483 aaKnown RBP21.88■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms