RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CATSPEREQ5SY80 951 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 LHFPL2Q6ZUX7 228 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 ASB15Q8WXK1 588 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 LCORQ96JN0 433 aaPredicted RBP5.45□□□□□ -1.54
SMC4-225ENST00000497203 TEPSINQ96N21 525 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 GBP4Q96PP9 640 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 PCIF1Q9H4Z3 704 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 INCENPQ9NQS7 918 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 ACSS2Q9NR19 701 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 SPTLC3Q9NUV7 552 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 UCKL1Q9NWZ5 548 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 SPO11Q9Y5K1 396 aa5.45□□□□□ -1.54
SMC4-225ENST00000497203 KATNA1O75449 491 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 CHGBP05060 677 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 SDHAP31040 664 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 ITKQ08881 620 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 MTMR1Q13613 665 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 LRSAM1Q6UWE0 723 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 KIAA1958Q8N8K9 716 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 JDP2Q8WYK2 163 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 SLC5A5Q92911 643 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 MTMR8Q96EF0 704 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 MENTQ9BUN1 341 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 AMNQ9BXJ7 453 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 GALNT8Q9NY28 637 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 SPEF1Q9Y4P9 236 aa5.44□□□□□ -1.54
SMC4-225ENST00000497203 PRAMEF22A3QJZ6 481 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 H0Y858 1186 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 MARCH6O60337 910 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 B4GALT3O60512 393 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 ALDH1L1O75891 902 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 CYP17A1P05093 508 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 LSP1P33241 339 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 KIF11P52732 1056 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 EPHB1P54762 984 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 PHC1P78364 1004 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 IL13RA1P78552 427 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 KIAA2012Q0VF49 1180 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 NFATC3Q12968 1075 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 DDB1Q16531 1140 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 ZFYVE27Q5T4F4 411 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 GPR158Q5T848 1215 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 CREB3L3Q68CJ9 461 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 CC2D1AQ6P1N0 951 aaPredicted RBP5.43□□□□□ -1.54
SMC4-225ENST00000497203 HDGFL2Q7Z4V5 671 aaPredicted RBP5.43□□□□□ -1.54
SMC4-225ENST00000497203 ZZZ3Q8IYH5 903 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 CNTD1Q8N815 330 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 ASPSCR1Q9BZE9 553 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 TCEAL9Q9UHQ7 104 aa5.43□□□□□ -1.54
SMC4-225ENST00000497203 K7ESF4 209 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 SYN1P17600 705 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 TTF1Q15361 905 aaPredicted RBP5.42□□□□□ -1.54
SMC4-225ENST00000497203 UBXN11Q5T124 520 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 SYDE2Q5VT97 1194 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 Q6ZUG5 572 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 FAM124AQ86V42 546 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 LGI4Q8N135 537 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 KLHL36Q8N4N3 616 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 HIPK4Q8NE63 616 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 COG1Q8WTW3 980 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 ERCC4Q92889 916 aaPredicted RBP5.42□□□□□ -1.54
SMC4-225ENST00000497203 FOXRED1Q96CU9 486 aaPredicted RBP5.42□□□□□ -1.54
SMC4-225ENST00000497203 TOMM22Q9NS69 142 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 ADAM29Q9UKF5 820 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 TRHDEQ9UKU6 1024 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 G3BP2Q9UN86 482 aaKnown RBP5.42□□□□□ -1.54
SMC4-225ENST00000497203 INVSQ9Y283 1065 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 ZDHHC9Q9Y397 364 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 ASB1Q9Y576 335 aa5.42□□□□□ -1.54
SMC4-225ENST00000497203 GOLGA6L22H0YM25 854 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 PRKD3O94806 890 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 SLC9A1P19634 815 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 ECE1P42892 770 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 FNTBP49356 437 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 NEK2P51955 445 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 STILQ15468 1287 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 WDR72Q3MJ13 1102 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 BORAQ6PGQ7 559 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 DPP8Q6V1X1 898 aaPredicted RBP5.41□□□□□ -1.54
SMC4-225ENST00000497203 RTN4RL1Q86UN2 441 aaPredicted RBP5.41□□□□□ -1.54
SMC4-225ENST00000497203 NME9Q86XW9 330 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 KBTBD2Q8IY47 623 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 ZNF610Q8N9Z0 462 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 CXorf38Q8TB03 319 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 AHCYL2Q96HN2 611 aaKnown RBP5.41□□□□□ -1.54
SMC4-225ENST00000497203 AJUBAQ96IF1 538 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 BTBD2Q9BX70 525 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 BARX1Q9HBU1 254 aaPredicted RBP5.41□□□□□ -1.54
SMC4-225ENST00000497203 H2AFY2Q9P0M6 372 aaPredicted RBP5.41□□□□□ -1.54
SMC4-225ENST00000497203 WASHC2AQ641Q2 1341 aa5.41□□□□□ -1.54
SMC4-225ENST00000497203 E2F8A0AVK6 867 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 TGM5O43548 720 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 CD40P25942 277 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 PTX3P26022 381 aaPredicted RBP5.4□□□□□ -1.54
SMC4-225ENST00000497203 CSF2RBP32927 897 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 ADCY8P40145 1251 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 SMAD3P84022 425 aaKnown RBP5.4□□□□□ -1.54
SMC4-225ENST00000497203 CD83Q01151 205 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 ADCY1Q08828 1119 aa5.4□□□□□ -1.54
SMC4-225ENST00000497203 LRRC32Q14392 662 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms