RNA–Protein interactions for RNA: ENST00000497026.5

CSMD3-208, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 1,406 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-208ENST00000497026 TMX4Q9H1E5 349 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 TAF1DQ9H5J8 278 aaPredicted RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 NOL6Q9H6R4 1146 aaKnown RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 DBNDD1Q9H9R9 158 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 NOB1Q9ULX3 412 aaKnown RBP6.03□□□□□ -1.44
CSMD3-208ENST00000497026 XDHP47989 1333 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 IRS2Q9Y4H2 1338 aa6.03□□□□□ -1.44
CSMD3-208ENST00000497026 MED23Q9ULK4 1368 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 TEX51A0A1B0GUA7 166 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 UFL1O94874 794 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 HSPA6P17066 643 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 CD247P20963 164 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 VAMP1P23763 118 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 KLRK1P26718 216 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 VIPR1P32241 457 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 EPHB3P54753 998 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 EIF6P56537 245 aaKnown RBP6.02□□□□□ -1.45
CSMD3-208ENST00000497026 SSPNQ14714 243 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 SLCO6A1Q86UG4 719 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 ANKRD44Q8N8A2 993 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 GPRASP2Q96D09 838 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 BICC1Q9H694 974 aaKnown RBP6.02□□□□□ -1.45
CSMD3-208ENST00000497026 CRTAC1Q9NQ79 661 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 SIRT5Q9NXA8 310 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 C9orf78Q9NZ63 289 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-208ENST00000497026 KIAA1522Q9P206 1035 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-208ENST00000497026 IMPACTQ9P2X3 320 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 ZNF214Q9UL59 606 aaPredicted RBP6.02□□□□□ -1.45
CSMD3-208ENST00000497026 CNOT6Q9ULM6 557 aaKnown RBP6.02□□□□□ -1.45
CSMD3-208ENST00000497026 KIF16BQ96L93 1317 aa6.02□□□□□ -1.45
CSMD3-208ENST00000497026 SHTN1A0MZ66 631 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 ANKRD18BA2A2Z9 1011 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 IQCA1LA6NCM1 817 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 NUDT19A8MXV4 375 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 SNAP23O00161 211 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 ECE2O60344 883 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 SEMA7AO75326 666 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 RAD17O75943 681 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 MSL3P1P0C860 447 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 TRIM27P14373 513 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 EPHX2P34913 555 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 IGHMBP2P38935 993 aaKnown RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 EPS15P42566 896 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 CCT4P50991 539 aaKnown RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 CYP4F8P98187 520 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 CHRNDQ07001 517 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 FSTL1Q12841 308 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 IFIT5Q13325 482 aaKnown RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 PPP2R5EQ16537 467 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 GNPTABQ3T906 1256 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 C16orf71Q8IYS4 520 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 SMC1BQ8NDV3 1235 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 PANK1Q8TE04 598 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 NAP1L5Q96NT1 182 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 MEIS3Q99687 375 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 API5Q9BZZ5 524 aaKnown RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 MBD1Q9UIS9 605 aaPredicted RBP6.01□□□□□ -1.45
CSMD3-208ENST00000497026 HACL1Q9UJ83 578 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 ZNF609O15014 1411 aa6.01□□□□□ -1.45
CSMD3-208ENST00000497026 ARAP2Q8WZ64 1704 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 PSMD14O00487 310 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 CBFA2T2O43439 604 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 TAF5LO75529 589 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 CD3EP07766 207 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 IFNGR1P15260 489 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 RFX5P48382 616 aaPredicted RBP6□□□□□ -1.45
CSMD3-208ENST00000497026 SOX9P48436 509 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 NASPP49321 788 aaPredicted RBP6□□□□□ -1.45
CSMD3-208ENST00000497026 RAB3GAP1Q15042 981 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 ATF7IPQ6VMQ6 1270 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 ARHGAP45Q92619 1136 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 FGD4Q96M96 766 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 FCRL3Q96P31 734 aaPredicted RBP6□□□□□ -1.45
CSMD3-208ENST00000497026 EYA3Q99504 573 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 MPHOSPH8Q99549 860 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 SRRTQ9BXP5 876 aaKnown RBP6□□□□□ -1.45
CSMD3-208ENST00000497026 PUS3Q9BZE2 481 aaKnown RBP6□□□□□ -1.45
CSMD3-208ENST00000497026 ACBD3Q9H3P7 528 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 PRR13Q9NZ81 148 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 GPRC5DQ9NZD1 345 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 KLHL14Q9P2G3 628 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 KCTD3Q9Y597 815 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 FHOD1Q9Y613 1164 aa6□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQ27 194 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQ45 241 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQ64 194 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQC6 194 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQD8 194 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQH9 124 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 A0A1W2PQY0 241 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 MPOP05164 745 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ITGA4P13612 1032 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 GIPRP48546 466 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 GMPSP49915 693 aaPredicted RBP5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ERVFRD-1P60508 538 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 HTRA3P83110 453 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 CCDC57Q2TAC2 916 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 ANKRD39Q53RE8 183 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 LDHAL6AQ6ZMR3 332 aa5.99□□□□□ -1.45
CSMD3-208ENST00000497026 LDHDQ86WU2 507 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms