RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 KSR1Q8IVT5 923 aa18.67■□□□□ 0.58
LMNA-216ENST00000496738 AFG1LQ8WV93 481 aa18.67■□□□□ 0.58
LMNA-216ENST00000496738 DUSP9Q99956 384 aaKnown RBP18.67■□□□□ 0.58
LMNA-216ENST00000496738 RNF186Q9NXI6 227 aa18.67■□□□□ 0.58
LMNA-216ENST00000496738 LAMC2Q13753 1193 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 ZC2HC1CQ53FD0 456 aaPredicted RBP18.66■□□□□ 0.58
LMNA-216ENST00000496738 MSL3Q8N5Y2 521 aaKnown RBP18.66■□□□□ 0.58
LMNA-216ENST00000496738 XPO4Q9C0E2 1151 aaKnown RBP18.66■□□□□ 0.58
LMNA-216ENST00000496738 ZNF131P52739 623 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 PTPN21Q16825 1174 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 DUSP28Q4G0W2 176 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 CDKAL1Q5VV42 579 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 CSGALNACT2Q8N6G5 542 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 AFAP1L1Q8TED9 768 aa18.66■□□□□ 0.58
LMNA-216ENST00000496738 SRRTQ9BXP5 876 aaKnown RBP18.66■□□□□ 0.58
LMNA-216ENST00000496738 BICDL2A1A5D9 508 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 PPP1R2P41236 205 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 FLT3LGP49771 235 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 SP3Q02447 781 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 TNFAIP2Q03169 654 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 PRKCZQ05513 592 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 KCNA1Q09470 495 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 CENPPQ6IPU0 288 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 FAM178BQ8IXR5 827 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 REM2Q8IYK8 340 aaPredicted RBP18.65■□□□□ 0.58
LMNA-216ENST00000496738 OR6J1Q8NGC5 347 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 TRIM44Q96DX7 344 aaPredicted RBP18.65■□□□□ 0.58
LMNA-216ENST00000496738 IKZF4Q9H2S9 585 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 OLFML3Q9NRN5 406 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 LGR5O75473 907 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 FIZ1Q96SL8 496 aa18.65■□□□□ 0.58
LMNA-216ENST00000496738 ZNF865P0CJ78 1059 aaPredicted RBP18.64■□□□□ 0.58
LMNA-216ENST00000496738 POLGP54098 1239 aaPredicted RBP18.64■□□□□ 0.58
LMNA-216ENST00000496738 TERF1P54274 439 aa18.64■□□□□ 0.58
LMNA-216ENST00000496738 OLFML2BQ68BL8 750 aa18.64■□□□□ 0.58
LMNA-216ENST00000496738 IQSEC1Q6DN90 963 aa18.64■□□□□ 0.58
LMNA-216ENST00000496738 EPM2AIP1Q7L775 607 aaPredicted RBP18.64■□□□□ 0.58
LMNA-216ENST00000496738 DRC7Q8IY82 874 aa18.64■□□□□ 0.58
LMNA-216ENST00000496738 ATP6V0A4Q9HBG4 840 aa18.64■□□□□ 0.58
LMNA-216ENST00000496738 XPNPEP1Q9NQW7 623 aa18.64■□□□□ 0.58
LMNA-216ENST00000496738 MYH11P35749 1972 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 K7ENM7 598 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 HOXD13P35453 343 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 UBASH3AP57075 661 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 IRX5P78411 483 aaPredicted RBP18.64■□□□□ 0.57
LMNA-216ENST00000496738 PPTC7Q8NI37 304 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 NRBP2Q9NSY0 501 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 EMSYQ7Z589 1322 aa18.64■□□□□ 0.57
LMNA-216ENST00000496738 KCNJ18B7U540 433 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 DGAT1O75907 488 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 LGALS2P05162 132 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 PLS3P13797 630 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 PEX3P56589 373 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 KCNJ12Q14500 433 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 EMC2Q15006 297 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 PLCB4Q15147 1175 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 CD99L2Q8TCZ2 262 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 TRIB2Q92519 343 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 DRC1Q96MC2 740 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 TRPC6Q9Y210 931 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 DYNC1LI2O43237 492 aaPredicted RBP18.63■□□□□ 0.57
LMNA-216ENST00000496738 MAP2K2P36507 400 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 KIF22Q14807 665 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 IRF2BP1Q8IU81 584 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 TRAPPC12Q8WVT3 735 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 BSNDQ8WZ55 320 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 TMEM143Q96AN5 459 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 TSG101Q99816 390 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 KIFC3Q9BVG8 833 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 NIFKQ9BYG3 293 aaKnown RBP18.63■□□□□ 0.57
LMNA-216ENST00000496738 KCTD10Q9H3F6 313 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 SMARCAD1Q9H4L7 1026 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 LARSQ9P2J5 1176 aaKnown RBP18.63■□□□□ 0.57
LMNA-216ENST00000496738 SEL1LQ9UBV2 794 aa18.63■□□□□ 0.57
LMNA-216ENST00000496738 PLPPR4Q7Z2D5 763 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 ZNF720Q7Z2F6 126 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 POLR3FQ9H1D9 316 aaPredicted RBP18.62■□□□□ 0.57
LMNA-216ENST00000496738 SLC16A4O15374 487 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 KIF20AO95235 890 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 PTMAP06454 111 aaKnown RBP18.62■□□□□ 0.57
LMNA-216ENST00000496738 TRIM32Q13049 653 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 ZCWPW2Q504Y3 356 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 PLCD3Q8N3E9 789 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 EMID1Q96A84 441 aaPredicted RBP18.62■□□□□ 0.57
LMNA-216ENST00000496738 ZBTB10Q96DT7 871 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 MRFAP1L1Q96HT8 127 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 RNPEPQ9H4A4 650 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 PDLIM7Q9NR12 457 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 TAB2Q9NYJ8 693 aa18.62■□□□□ 0.57
LMNA-216ENST00000496738 CCDC169A6NNP5 214 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 MMP3P08254 477 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 KRT31Q15323 416 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 KNOP1Q1ED39 458 aaKnown RBP18.61■□□□□ 0.57
LMNA-216ENST00000496738 TCP11X2Q5H9J9 407 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 MTERF4Q7Z6M4 381 aaKnown RBP18.61■□□□□ 0.57
LMNA-216ENST00000496738 TLK2Q86UE8 772 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 ATP8B4Q8TF62 1192 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 FAM167AQ96KS9 214 aa18.61■□□□□ 0.57
LMNA-216ENST00000496738 CEP89Q96ST8 783 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms