RNA–Protein interactions for RNA: ENST00000495799.5

PPP1R3F-205, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 1 (best) BASIC

Gene PPP1R3F, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-205ENST00000495799 SFI1A8K8P3 1242 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 PLS3P13797 630 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 CYP2B6P20813 491 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 KIF22Q14807 665 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 MTERF2Q49AM1 385 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 HSP90AA4PQ58FG1 418 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 EXOC8Q8IYI6 725 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 GLIS3Q8NEA6 775 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 PPTC7Q8NI37 304 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 ZNF507Q8TCN5 953 aa26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 LIMA1Q9UHB6 759 aaKnown RBP26.93■■□□□ 1.9
PPP1R3F-205ENST00000495799 KCNJ18B7U540 433 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 ECM2O94769 699 aaPredicted RBP26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 TPM2P07951 284 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 ATP4AP20648 1035 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 MAP2K2P36507 400 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 RFC5P40937 340 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 LACTBP83111 547 aaPredicted RBP26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 KCNJ12Q14500 433 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 KNOP1Q1ED39 458 aaKnown RBP26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 FAM102BQ5T8I3 360 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 DAW1Q8N136 415 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 BBXQ8WY36 941 aaPredicted RBP26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 CFHR5Q9BXR6 569 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 FGFBP2Q9BYJ0 223 aa26.92■■□□□ 1.9
PPP1R3F-205ENST00000495799 CALUO43852 315 aaPredicted RBP26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 MYBP10242 640 aa26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 PSMC4P43686 418 aa26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 POLGP54098 1239 aaPredicted RBP26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 HS1BP3Q53T59 392 aa26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 TCP11X2Q5H9J9 407 aa26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 MAEAQ7L5Y9 396 aa26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 NELFCDQ8IXH7 590 aa26.91■■□□□ 1.9
PPP1R3F-205ENST00000495799 DOCK3Q8IZD9 2030 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 XRCC5P13010 732 aaKnown RBP26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 CASP5P51878 434 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 RTP1P59025 263 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 FKBP3Q00688 224 aaKnown RBP26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 EDRF1Q3B7T1 1238 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 ZCWPW2Q504Y3 356 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 ZNF720Q7Z2F6 126 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 SH2D3AQ9BRG2 576 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 KCTD10Q9H3F6 313 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 PDXKO00764 312 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 ABCD1P33897 745 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 SMTNP53814 917 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 TNFAIP2Q03169 654 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 CCDC144BQ3MJ40 725 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 OR6J1Q8NGC5 347 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 ATP8B4Q8TF62 1192 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 SLC7A3Q8WY07 619 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 CEP63Q96MT8 703 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 ST6GALNAC4Q9H4F1 302 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 POLD4Q9HCU8 107 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 PDLIM7Q9NR12 457 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 TYW1Q9NV66 732 aaKnown RBP26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 NRBP1Q9UHY1 535 aa26.9■■□□□ 1.9
PPP1R3F-205ENST00000495799 A0A1B0GTH6 734 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 K7ENM7 598 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 PRPF6O94906 941 aaKnown RBP26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 SMPD1P17405 629 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 NMT1P30419 496 aaKnown RBP26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 DMP1Q13316 513 aaPredicted RBP26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 EMC2Q15006 297 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 SPC24Q8NBT2 197 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 FIZ1Q96SL8 496 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 ERAP1Q9NZ08 941 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 TRAF3IP3Q9Y228 551 aa26.89■■□□□ 1.89
PPP1R3F-205ENST00000495799 LRRC10BA6NIK2 292 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 GAS2O43903 313 aaKnown RBP26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 GNA14O95837 355 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 SP3Q02447 781 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 KRT31Q15323 416 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 HVCN1Q96D96 273 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 IFT74Q96LB3 600 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 JPH2Q9BR39 696 aaPredicted RBP26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 DHX33Q9H6R0 707 aaKnown RBP26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 FLRT1Q9NZU1 646 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 IMPACTQ9P2X3 320 aa26.88■■□□□ 1.89
PPP1R3F-205ENST00000495799 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 H0YCG3 227 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 HBP1O60381 514 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 PPFIA4O75335 1185 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 SCP2P22307 547 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 TARBP2Q15633 366 aaKnown RBP26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 GOLGA5Q8TBA6 731 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 SPIRE2Q8WWL2 714 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 CNOT6LQ96LI5 555 aaKnown RBP26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 TMEM206Q9H813 350 aa26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 ZNF215Q9UL58 517 aaPredicted RBP26.87■■□□□ 1.89
PPP1R3F-205ENST00000495799 RPL13P26373 211 aaKnown RBP26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 COPB1P53618 953 aaKnown RBP26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 NCKAP1LP55160 1127 aa26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 TMEM63BQ5T3F8 832 aa26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 IRF2BP1Q8IU81 584 aa26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 CREBRFQ8IUR6 639 aa26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 AFG1LQ8WV93 481 aa26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 NAP1L5Q96NT1 182 aaPredicted RBP26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 GPRC5CQ9NQ84 441 aa26.86■■□□□ 1.89
PPP1R3F-205ENST00000495799 CETN3O15182 167 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms