RNA–Protein interactions for RNA: ENST00000495645.5

CHPF2-204, Transcript of chondroitin polymerizing factor 2, humanhuman

TSL 2 BASIC

Gene CHPF2, Length 2,709 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-204ENST00000495645 SLC10A4Q96EP9 437 aa16.31■□□□□ 0.2
CHPF2-204ENST00000495645 TBC1D22BQ9NU19 505 aa16.31■□□□□ 0.2
CHPF2-204ENST00000495645 RBBP6Q7Z6E9 1792 aaKnown RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 PAPPA2Q9BXP8 1791 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 WDR64B1ANS9 1081 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 K7ENM7 598 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 GJB7Q6PEY0 223 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 COPS5Q92905 334 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 CCDC43Q96MW1 224 aaKnown RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 JPH1Q9HDC5 661 aaPredicted RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 DUSP10Q9Y6W6 482 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 POTEB2H3BUK9 544 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 TRIM49P0CI25 452 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 TRIM49CP0CI26 452 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 SLC9A1P19634 815 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 ALDH5A1P51649 535 aaPredicted RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 GABPB1Q06547 395 aaPredicted RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 RRAGAQ7L523 313 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 FAM114A1Q8IWE2 563 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 ZNF668Q96K58 619 aaPredicted RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 FAM53CQ9NYF3 392 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 PUF60Q9UHX1 559 aaKnown RBP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 CAPN11Q9UMQ6 739 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 PCDHA10Q9Y5I2 948 aa16.3■□□□□ 0.2
CHPF2-204ENST00000495645 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.3■□□□□ 0.2
CHPF2-204ENST00000495645 RCCD1A6NED2 376 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 FDX1P10109 184 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 ATP4AP20648 1035 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 KCNJ6P48051 423 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 KCNH2Q12809 1159 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 FKBP15Q5T1M5 1219 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 TRIM59Q8IWR1 403 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 ANKRD13CQ8N6S4 541 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 OR8K1Q8NGG5 319 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 IPO4Q8TEX9 1081 aaKnown RBP16.29■□□□□ 0.2
CHPF2-204ENST00000495645 NMRK2Q9NPI5 230 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 PDGFCQ9NRA1 345 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 AGTPBP1Q9UPW5 1226 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 CETN3O15182 167 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 ZSCAN12O43309 604 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 MARK3P27448 753 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 HOXA7P31268 230 aaPredicted RBP16.29■□□□□ 0.2
CHPF2-204ENST00000495645 TMCO3Q6UWJ1 677 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 NIPA1Q7RTP0 329 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 PPP1R13LQ8WUF5 828 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 CEP170P1Q96L14 293 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 FGD4Q96M96 766 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 CBWD1Q9BRT8 395 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 SLC9A2Q9UBY0 812 aa16.29■□□□□ 0.2
CHPF2-204ENST00000495645 A0A1W2PQC6 194 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 GOLGA8IPA6NC78 632 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 LRRC53A6NM62 1247 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 GOLGA8JA6NMD2 632 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 GRIN3BO60391 1043 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 NOL4O94818 638 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 TPM1P09493 284 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 PPP2R3AQ06190 1150 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 MTERF2Q49AM1 385 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 RIOX2Q8IUF8 465 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 FBXO16Q8IX29 292 aaPredicted RBP16.28■□□□□ 0.2
CHPF2-204ENST00000495645 OLFML3Q9NRN5 406 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 SEPT9Q9UHD8 586 aaPredicted RBP16.28■□□□□ 0.2
CHPF2-204ENST00000495645 AJAP1Q9UKB5 411 aaPredicted RBP16.28■□□□□ 0.2
CHPF2-204ENST00000495645 PTPRFP10586 1907 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 CCDC169A6NNP5 214 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 ZNF131P52739 623 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 POLR2FP61218 127 aaKnown RBP16.28■□□□□ 0.2
CHPF2-204ENST00000495645 PSMC5P62195 406 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 BMS1Q14692 1282 aaKnown RBP16.28■□□□□ 0.2
CHPF2-204ENST00000495645 STXBP2Q15833 593 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 ZC3H15Q8WU90 426 aaKnown RBP16.28■□□□□ 0.2
CHPF2-204ENST00000495645 ERGIC2Q96RQ1 377 aa16.28■□□□□ 0.2
CHPF2-204ENST00000495645 SPATA31C2B4DYI2 1134 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 STBD1O95210 358 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 UBA1P22314 1058 aaKnown RBP16.27■□□□□ 0.2
CHPF2-204ENST00000495645 DLG4P78352 724 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 PRKCEQ02156 737 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 SYCP3Q8IZU3 236 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 LSM14BQ9BX40 385 aaKnown RBP16.27■□□□□ 0.2
CHPF2-204ENST00000495645 MAP3K20Q9NYL2 800 aaKnown RBP16.27■□□□□ 0.2
CHPF2-204ENST00000495645 KCNH4Q9UQ05 1017 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 TRAF3IP3Q9Y228 551 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 LAMA2P24043 3122 aaKnown RBP16.27■□□□□ 0.2
CHPF2-204ENST00000495645 WDR90Q96KV7 1748 aa16.27■□□□□ 0.2
CHPF2-204ENST00000495645 ZNF263O14978 683 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 PPP1R2P41236 205 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 PPIL2Q13356 520 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 LDLRAD1Q5T700 205 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 ARMC9Q7Z3E5 817 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 TMEM143Q96AN5 459 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 GPRASP2Q96D09 838 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 DNAJC7Q99615 494 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 TMEM51Q9NW97 253 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 ARMCX3Q9UH62 379 aaPredicted RBP16.27■□□□□ 0.19
CHPF2-204ENST00000495645 PFASO15067 1338 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 ADGRA3Q8IWK6 1321 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 KIAA1217Q5T5P2 1943 aa16.27■□□□□ 0.19
CHPF2-204ENST00000495645 ZRANB2O95218 330 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHPF2-204ENST00000495645 KRT76Q01546 638 aa16.26■□□□□ 0.19
CHPF2-204ENST00000495645 HSDL1Q3SXM5 330 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms