RNA–Protein interactions for RNA: ENST00000495423.1

SIMC1-208, Transcript of SUMO interacting motifs containing 1, humanhuman

TSL 2

Gene SIMC1, Length 913 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1-208ENST00000495423 TMEM260Q9NX78 707 aa26.27■■□□□ 1.8
SIMC1-208ENST00000495423 HCSTQ9UBK5 93 aa26.27■■□□□ 1.8
SIMC1-208ENST00000495423 CNTNAP5Q8WYK1 1306 aa26.27■■□□□ 1.8
SIMC1-208ENST00000495423 ST18O60284 1047 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 SRGAP2BP0DMP2 458 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 PTPN21Q16825 1174 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 ZNF484Q5JVG2 852 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 FAM160B1Q5W0V3 765 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 NIPA1Q7RTP0 329 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 CCDC60Q8IWA6 550 aaPredicted RBP26.26■■□□□ 1.79
SIMC1-208ENST00000495423 PGBD1Q96JS3 809 aa26.26■■□□□ 1.79
SIMC1-208ENST00000495423 ELAC1Q9H777 363 aaKnown RBP26.26■■□□□ 1.79
SIMC1-208ENST00000495423 RIF1Q5UIP0 2472 aaKnown RBP26.25■■□□□ 1.79
SIMC1-208ENST00000495423 ZBTB42B2RXF5 422 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 LAG3P18627 525 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 PSMA5P28066 241 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 SREBF1P36956 1147 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 NAPAP54920 295 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 PLCB3Q01970 1234 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 MICU3Q86XE3 530 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 ATP6V0A4Q9HBG4 840 aa26.25■■□□□ 1.79
SIMC1-208ENST00000495423 PTPRZ1P23471 2315 aaPredicted RBP26.24■■□□□ 1.79
SIMC1-208ENST00000495423 BACH1O14867 736 aa26.24■■□□□ 1.79
SIMC1-208ENST00000495423 CRYBB1P53674 252 aaPredicted RBP26.24■■□□□ 1.79
SIMC1-208ENST00000495423 VCPP55072 806 aaKnown RBP26.24■■□□□ 1.79
SIMC1-208ENST00000495423 ANKRD54Q6NXT1 300 aa26.24■■□□□ 1.79
SIMC1-208ENST00000495423 FAM228AQ86W67 206 aa26.24■■□□□ 1.79
SIMC1-208ENST00000495423 RASEFQ8IZ41 740 aa26.24■■□□□ 1.79
SIMC1-208ENST00000495423 MRPS27Q92552 414 aaKnown RBP26.24■■□□□ 1.79
SIMC1-208ENST00000495423 TM6SF1Q9BZW5 370 aa26.24■■□□□ 1.79
SIMC1-208ENST00000495423 SNX14Q9Y5W7 946 aa26.24■■□□□ 1.79
SIMC1-208ENST00000495423 MYO15AQ9UKN7 3530 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 FGFR1P11362 822 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 ADCY7P51828 1080 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 AP3B2Q13367 1082 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 DSC3Q14574 896 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 SYCE2Q6PIF2 218 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 SNX27Q96L92 541 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 LRRC2Q9BYS8 371 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 ZNF302Q9NR11 478 aa26.23■■□□□ 1.79
SIMC1-208ENST00000495423 hCG_1984214I3L0E3 225 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 DDX39AO00148 427 aaKnown RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 DHX15O43143 795 aaKnown RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 C22orf31O95567 290 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 ATP4AP20648 1035 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 AVPR2P30518 371 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 TECP42680 631 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 CLK2P49760 499 aaKnown RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 FUT2Q10981 343 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 KIZQ2M2Z5 673 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 PLPP4Q5VZY2 271 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 PDXDC2PQ6P474 469 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 ZNF713Q8N859 430 aaPredicted RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 OSMRQ99650 979 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 TMEM117Q9H0C3 514 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 IRF2BPLQ9H1B7 796 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 UPF2Q9HAU5 1272 aaKnown RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 RBM28Q9NW13 759 aaKnown RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 PUF60Q9UHX1 559 aaKnown RBP26.22■■□□□ 1.79
SIMC1-208ENST00000495423 FAM186AA6NE01 2351 aa26.22■■□□□ 1.79
SIMC1-208ENST00000495423 GPR32O75388 356 aa26.21■■□□□ 1.79
SIMC1-208ENST00000495423 HOXB8P17481 243 aaPredicted RBP26.21■■□□□ 1.79
SIMC1-208ENST00000495423 APOBRQ0VD83 1088 aa26.21■■□□□ 1.79
SIMC1-208ENST00000495423 MIS18BP1Q6P0N0 1132 aa26.21■■□□□ 1.79
SIMC1-208ENST00000495423 TCF25Q9BQ70 676 aa26.21■■□□□ 1.79
SIMC1-208ENST00000495423 GLT8D2Q9H1C3 349 aa26.21■■□□□ 1.79
SIMC1-208ENST00000495423 NGRNQ9NPE2 291 aaKnown RBP26.21■■□□□ 1.79
SIMC1-208ENST00000495423 HOXA2O43364 376 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 NUBP1P53384 320 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 SWSAP1Q6NVH7 229 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 APOA5Q6Q788 366 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 SYNE3Q6ZMZ3 975 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 LRRC55Q6ZSA7 311 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 DHX32Q7L7V1 743 aaKnown RBP26.2■■□□□ 1.78
SIMC1-208ENST00000495423 FBXL16Q8N461 479 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 BBXQ8WY36 941 aaPredicted RBP26.2■■□□□ 1.78
SIMC1-208ENST00000495423 ENTPD7Q9NQZ7 604 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 RNF19AQ9NV58 838 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 BARHL2Q9NY43 387 aa26.2■■□□□ 1.78
SIMC1-208ENST00000495423 MAFBQ9Y5Q3 323 aaPredicted RBP26.2■■□□□ 1.78
SIMC1-208ENST00000495423 IGLV3-22A0A075B6J6 115 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 SMCO2A6NFE2 343 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 HIDE1A8MVS5 230 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 FAM86B1E9PN63 330 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 SEC24BO95487 1268 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 FAM86B2P0C5J1 330 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 PPM1AP35813 382 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 ZNF76P36508 570 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 KCNT2Q6UVM3 1135 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 PLA2G4DQ86XP0 818 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 CRYGNQ8WXF5 182 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 CASD1Q96PB1 797 aa26.19■■□□□ 1.78
SIMC1-208ENST00000495423 VTNP04004 478 aa26.18■■□□□ 1.78
SIMC1-208ENST00000495423 DENND4AQ7Z401 1863 aa26.18■■□□□ 1.78
SIMC1-208ENST00000495423 LRRC43Q8N309 656 aa26.18■■□□□ 1.78
SIMC1-208ENST00000495423 PPP1R16BQ96T49 567 aa26.18■■□□□ 1.78
SIMC1-208ENST00000495423 BACH2Q9BYV9 841 aa26.18■■□□□ 1.78
SIMC1-208ENST00000495423 FAM86C1Q9NVL1 165 aa26.18■■□□□ 1.78
SIMC1-208ENST00000495423 IPO5O00410 1097 aaKnown RBP26.17■■□□□ 1.78
SIMC1-208ENST00000495423 GFRA3O60609 400 aa26.17■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms