RNA–Protein interactions for RNA: ENST00000494727.1

ACSS2-223, Transcript of acyl-CoA synthetase short chain family member 2, human

TSL 2

Gene ACSS2, Length 1,030 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ACSS2-223	ENST00000494727	PRDM9	Q9NQV7	894 aa		11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	ZNF302	Q9NR11	478 aa		11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	MTMR10	Q9NXD2	777 aa		11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	GABBR1	Q9UBS5	961 aa		11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	DDX25	Q9UHL0	483 aa	Known RBP	11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	LIMCH1	Q9UPQ0	1083 aa		11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	YBX2	Q9Y2T7	364 aa	Known RBP	11.2	□□□□□ -0.62
ACSS2-223	ENST00000494727	SZT2	Q5T011	3432 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727		M0R2N6	131 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	SLC37A4	O43826	429 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	CCNT1	O60563	726 aa	Known RBP	11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	GHR	P10912	638 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	IBSP	P21815	317 aa	Predicted RBP	11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	CIITA	P33076	1130 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	DEFB103A	P81534	67 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	RBL2	Q08999	1139 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	TRIM29	Q14134	588 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	QPCT	Q16769	361 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	GALNT17	Q6IS24	598 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	CNKSR3	Q6P9H4	555 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	ABHD15	Q6UXT9	468 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	UNC45A	Q9H3U1	944 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	TBC1D22B	Q9NU19	505 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	MSRA	Q9UJ68	235 aa		11.19	□□□□□ -0.62
ACSS2-223	ENST00000494727	RNF223	E7ERA6	249 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	MARCH6	O60337	910 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	LILRB3	O75022	631 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	PSAP	P07602	524 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	ATP2B1	P20020	1258 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	USP11	P51784	963 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	WDR5	P61964	334 aa	Known RBP	11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	ADAM17	P78536	824 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	KRT76	Q01546	638 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	RAB30	Q15771	203 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	UGCG	Q16739	394 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	MARCH8	Q5T0T0	291 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	KRT40	Q6A162	431 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	ZNF746	Q6NUN9	644 aa	Predicted RBP	11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	MIER3	Q7Z3K6	550 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	NEK8	Q86SG6	692 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	DIS3L2	Q8IYB7	885 aa	Known RBP	11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	DBF4B	Q8NFT6	615 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	SEMA6B	Q9H3T3	888 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	CERS4	Q9HA82	394 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	DISC1	Q9NRI5	854 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	GINS2	Q9Y248	185 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	CDY2A	Q9Y6F7	541 aa		11.18	□□□□□ -0.62
ACSS2-223	ENST00000494727	WDR64	B1ANS9	1081 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	ATG7	O95352	703 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	CXCL10	P02778	98 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	MMP1	P03956	469 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	CA3	P07451	260 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	RBM25	P49756	843 aa	Known RBP	11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	PRKCE	Q02156	737 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	GRIN2C	Q14957	1233 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	RABEP1	Q15276	862 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727		Q4G0T1	1027 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	PPP2R2D	Q66LE6	453 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	TAF2	Q6P1X5	1199 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	PLPPR4	Q7Z2D5	763 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	RSPH3	Q86UC2	560 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	SMAP1	Q8IYB5	467 aa	Predicted RBP	11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	MYOCD	Q8IZQ8	938 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	FAM184A	Q8NB25	1140 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	ATP8B4	Q8TF62	1192 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	SLC5A5	Q92911	643 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	SLC9A7	Q96T83	725 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	CDX2	Q99626	313 aa	Predicted RBP	11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	PRDM12	Q9H4Q4	367 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	ZNF576	Q9H609	170 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	PCDHA10	Q9Y5I2	948 aa		11.17	□□□□□ -0.62
ACSS2-223	ENST00000494727	IGSF9B	Q9UPX0	1349 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	IGKV6D-21	A0A0A0MT36	114 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	TMEM150B	A6NC51	233 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	RRN3P2	A6NIE6	340 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	BTBD18	B2RXH4	712 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727		M0QZ92	97 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	HBP1	O60381	514 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	BAIAP3	O94812	1187 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	ARHGEF15	O94989	841 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	UPP2	O95045	317 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	CD2BP2	O95400	341 aa	Known RBP	11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	PARN	O95453	639 aa	Known RBP	11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	CHRNA1	P02708	482 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	FOSL2	P15408	326 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	ATP4A	P20648	1035 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	MMP16	P51512	607 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	MRPS6	P82932	125 aa	Known RBP	11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	IKBKE	Q14164	716 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	MTHFD1L	Q6UB35	978 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	HERC6	Q8IVU3	1022 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	METTL13	Q8N6R0	699 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	BANK1	Q8NDB2	785 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	ETNPPL	Q8TBG4	499 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	SEPT8	Q92599	483 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	C8orf76	Q96K31	380 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	ZNF668	Q96K58	619 aa	Predicted RBP	11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	SH2D3A	Q9BRG2	576 aa		11.16	□□□□□ -0.62
ACSS2-223	ENST00000494727	SLC28A3	Q9HAS3	691 aa		11.16	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 34 ms