RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 CTGFP29279 349 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 LACTBP83111 547 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 KIF22Q14807 665 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 CAVIN4Q5BKX8 364 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 METTL24Q5JXM2 366 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 TDRD10Q5VZ19 366 aaKnown RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 APOBEC3HQ6NTF7 200 aaKnown RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 EEPD1Q7L9B9 569 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 ERO1BQ86YB8 467 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 TP53INP2Q8IXH6 220 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 ABI1Q8IZP0 508 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 MFSD4AQ8N468 514 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 FLCNQ8NFG4 579 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 DPF3Q92784 378 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 TEKT1Q969V4 418 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 ZNF512BQ96KM6 892 aaPredicted RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 WRNIP1Q96S55 665 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 BICC1Q9H694 974 aaKnown RBP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 CPA4Q9UI42 421 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.42□□□□□ -1.38
PTCD3-219ENST00000494323 MROH5Q6ZUA9 1318 aa6.42□□□□□ -1.38
PTCD3-219ENST00000494323 BRCA2P51587 3418 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 ANKRD34BA5PLL1 514 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 WDHD1O75717 1129 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-219ENST00000494323 PDE8BO95263 885 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 PSMC4P43686 418 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 OXCT1P55809 520 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 TCP10Q12799 353 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 SNAPC2Q13487 334 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 AUHQ13825 339 aaKnown RBP6.41□□□□□ -1.38
PTCD3-219ENST00000494323 PLEKHG4Q58EX7 1191 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 AXDND1Q5T1B0 1012 aaPredicted RBP6.41□□□□□ -1.38
PTCD3-219ENST00000494323 HEATR6Q6AI08 1181 aaKnown RBP6.41□□□□□ -1.38
PTCD3-219ENST00000494323 C7orf61Q8IZ16 206 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 FAM9BQ8IZU0 186 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 ANKRD44Q8N8A2 993 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 DTWD2Q8NBA8 298 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 ZDHHC15Q96MV8 337 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 HAUS7Q99871 368 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 MRIQ9BWK5 157 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 GBP3Q9H0R5 595 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 EPN3Q9H201 632 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 PRR13Q9NZ81 148 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 TMOD2Q9NZR1 351 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 ADGRE2Q9UHX3 823 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 PCDHB12Q9Y5F1 795 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 CAPN6Q9Y6Q1 641 aa6.41□□□□□ -1.38
PTCD3-219ENST00000494323 OTOFQ9HC10 1997 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 PDHXO00330 501 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 PPATQ06203 517 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 PPIL2Q13356 520 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 SQSTM1Q13501 440 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 DCAF15Q66K64 600 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 HHIPL2Q6UWX4 724 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 C17orf99Q6UX52 265 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 SPATC1Q76KD6 591 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 FAM83AQ86UY5 434 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 ZFPM1Q8IX07 1006 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 AGBL5Q8NDL9 886 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 ST13P5Q8NFI4 369 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-219ENST00000494323 TBC1D22AQ8WUA7 517 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 ZNF669Q96BR6 464 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-219ENST00000494323 Q96M66 194 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 USP44Q9H0E7 712 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 KLHL25Q9H0H3 589 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 ASCC2Q9H1I8 757 aaPredicted RBP6.4□□□□□ -1.38
PTCD3-219ENST00000494323 FAM86C1Q9NVL1 165 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 ZSWIM8A7E2V4 1837 aa6.4□□□□□ -1.38
PTCD3-219ENST00000494323 A0A1B0GUL6 1792 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 PRR33A8MZF0 331 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 SUSD5O60279 629 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 LRRN2O75325 713 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 CEACAM5P06731 702 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 EPHX1P07099 455 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 IFIT1P09914 478 aaKnown RBP6.39□□□□□ -1.39
PTCD3-219ENST00000494323 CYP2C8P10632 490 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 ZEB1P37275 1124 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-219ENST00000494323 TNK2Q07912 1038 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 IFRD2Q12894 506 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-219ENST00000494323 RABL6Q3YEC7 729 aaPredicted RBP6.39□□□□□ -1.39
PTCD3-219ENST00000494323 CDC42EP5Q6NZY7 148 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 VGLL2Q8N8G2 317 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 FAM181AQ8N9Y4 354 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 RAET1EQ8TD07 263 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 APBA2Q99767 749 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 ZNF341Q9BYN7 854 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 USP40Q9NVE5 1235 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 TMEM260Q9NX78 707 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 WHRNQ9P202 907 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 SRRDQ9UH36 339 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 FBXL21Q9UKT6 434 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 UTYO14607 1347 aa6.39□□□□□ -1.39
PTCD3-219ENST00000494323 DOCK3Q8IZD9 2030 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ESYT3A0FGR9 886 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 SHOXO15266 292 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 CBFA2T2O43439 604 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 PPM1BO75688 479 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 CCL5P13501 91 aa6.38□□□□□ -1.39
PTCD3-219ENST00000494323 ITGA4P13612 1032 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms